RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 NAMPTP43490 491 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 CDX1P47902 265 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 PRAMEP78395 509 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 GFPT1Q06210 699 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 KLRC3Q07444 240 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 ERCC8Q13216 396 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 TFDP1Q14186 410 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR1C1Q15619 314 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 CHRNA6Q15825 494 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 ZNF699Q32M78 642 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 ZNF791Q3KP31 576 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 BOLA3Q53S33 107 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 LGALS9CQ6DKI2 356 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 APOBEC3HQ6NTF7 200 aaKnown RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 TCF23Q7RTU1 214 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 THNSL1Q8IYQ7 743 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 LINC00518Q8N0U6 118 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 RNF10Q8N5U6 811 aaKnown RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 B3GNT7Q8NFL0 401 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR4F17Q8NGA8 305 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR9A4Q8NGU2 314 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 COQ8AQ8NI60 647 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 ST8SIA4Q92187 359 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 FAM46BQ96A09 425 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR2V2Q96R30 315 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR4F4Q96R69 305 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 TBL1YQ9BQ87 522 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 FAM103A1Q9BTL3 118 aaKnown RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 ROGDIQ9GZN7 287 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 DEFB127Q9H1M4 99 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 ANKZF1Q9H8Y5 726 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 XAB2Q9HCS7 855 aaKnown RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 TM9SF3Q9HD45 589 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 DDX19BQ9UMR2 479 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 SLC9A8Q9Y2E8 581 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 MRPS2Q9Y399 296 aaKnown RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 TMED7Q9Y3B3 224 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 USP16Q9Y5T5 823 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 HECTD1Q9ULT8 2610 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 RPRD2Q5VT52 1461 aaKnown RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 USP9YO00507 2555 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 SSH2Q76I76 1423 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 CHD3Q12873 2000 aaKnown RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 CACNA1SQ13698 1873 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 LOC100131303A0A0U1RQF7 123 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 A8MWP4 228 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 G3V3Q6 166 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 EI24O14681 340 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 SLC25A14O95258 325 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 BCHEP06276 602 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 UBTFL1P0CB47 393 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 ZNF705DP0CH99 300 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 ZNF705BP0CI00 300 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 ALOX12P18054 663 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 MAGEA5P43359 124 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 SLC6A8P48029 635 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 NPY4RP50391 375 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 CDH4P55283 916 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 PDIA5Q14554 519 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 KIAA0087Q14695 138 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 TBCEQ15813 527 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 CST6Q15828 149 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 SNAPC1Q16533 368 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 Q5BKY6 102 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 TMEM205Q6UW68 189 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 CYHR1Q6ZMK1 362 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 Q6ZRU5 148 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 ZNF767PQ75MW2 155 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 TSEN54Q7Z6J9 526 aaKnown RBP-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 CCAR1Q8IX12 1150 aaKnown RBP-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 DIS3L2Q8IYB7 885 aaKnown RBP-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 PYROXD2Q8N2H3 581 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 OR4K13Q8NH42 304 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 C15orf40Q8WUR7 153 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 OR5P3Q8WZ94 311 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 FLYWCH2Q96CP2 140 aaKnown RBP-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 CMTM5Q96DZ9 223 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 CCDC34Q96HJ3 373 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 C12orf42Q96LP6 360 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 DESI2Q9BSY9 194 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 TBCDQ9BTW9 1192 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 THUMPD3Q9BV44 507 aaKnown RBP-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 MRPL37Q9BZE1 423 aaKnown RBP-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 RABEP2Q9H5N1 569 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 KIR3DX1Q9H7L2 352 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 C5AR2Q9P296 337 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 CLCF1Q9UBD9 225 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 CD84Q9UIB8 345 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 KCNK6Q9Y257 313 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 CCL26Q9Y258 94 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 PIEZO2Q9H5I5 2752 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 CHD9Q3L8U1 2897 aa-1.85□□□□□ -2.71
RNU6-542P-201ENST00000516405 A0A0B4J203 849 aa-1.86□□□□□ -2.71
RNU6-542P-201ENST00000516405 ERICH4A6NGS2 130 aa-1.86□□□□□ -2.71
RNU6-542P-201ENST00000516405 ANKDD1BA6NHY2 528 aa-1.86□□□□□ -2.71
RNU6-542P-201ENST00000516405 GLOD5A6NK44 160 aa-1.86□□□□□ -2.71
RNU6-542P-201ENST00000516405 KNCNA6PVL3 124 aa-1.86□□□□□ -2.71
RNU6-542P-201ENST00000516405 RASGRF2O14827 1237 aa-1.86□□□□□ -2.71
RNU6-542P-201ENST00000516405 EIF5BO60841 1220 aaKnown RBP-1.86□□□□□ -2.71
RNU6-542P-201ENST00000516405 BCAS1O75363 584 aaPredicted RBP-1.86□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms