RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 IFT27Q9BW83 186 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ANGPTL4Q9BY76 406 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CCDC90BQ9GZT6 254 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 UBQLN3Q9H347 655 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PTGES2Q9H7Z7 377 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MED17Q9NVC6 651 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PAK1IP1Q9NWT1 392 aaPredicted RBP6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DNAJC27Q9NZQ0 273 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 IL20RAQ9UHF4 553 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 VDAC3Q9Y277 283 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ZNF337Q9Y3M9 751 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SMIM31A0A1B0GVY4 71 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ANKRD33BA6NCL7 494 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 EFCAB10A6NFE3 127 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SNTNA6NMZ2 147 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CLCA1A8K7I4 914 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 A8MVM7 634 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LRRN3E7EW58 273 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 BHLHE40O14503 412 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SURF4O15260 269 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GFRA3O60609 400 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ENTPD6O75354 484 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 AHSA1O95433 338 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 P04436 131 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 HTR1AP08908 422 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CCL3P10147 92 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ITGA3P26006 1051 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 RPL4P36578 427 aaKnown RBP6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CASRP41180 1078 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 APOBEC1P41238 236 aaKnown RBP6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ALDH3B2P48448 385 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MASP1P48740 699 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CYB561P49447 251 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MLLT10P55197 1068 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DLX5P56178 289 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FXYD6P3P58550 94 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PRPS1P60891 318 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OC90Q02509 493 aaPredicted RBP6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 EGR4Q05215 589 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PIGFQ07326 219 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 RTP5Q14D33 572 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NEDD8Q15843 81 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ZNF74Q16587 644 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TMEM44Q2T9K0 475 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ANKDD1AQ495B1 522 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NADK2Q4G0N4 442 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SYT14P1Q58G82 188 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC25A53Q5H9E4 307 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC25A30Q5SVS4 291 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ZNF468Q5VIY5 522 aaPredicted RBP6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ABHD17BQ5VST6 288 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ARSKQ6UWY0 536 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 THSD4Q6ZMP0 1018 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 KCTD8Q6ZWB6 473 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PRSS48Q7RTY5 328 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SATL1Q86VE3 508 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ADGRG3Q86Y34 549 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PLCZ1Q86YW0 608 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SPARTQ8N0X7 666 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 BEST3Q8N1M1 668 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LNX2Q8N448 690 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SVOPQ8N4V2 548 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FAM26EQ8N5C1 309 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LRRC17Q8N6Y2 441 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FADS6Q8N9I5 356 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CLEC1AQ8NC01 280 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TMEM163Q8TC26 289 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 STK35Q8TDR2 534 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LIPHQ8WWY8 451 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SGCDQ92629 289 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GGHQ92820 318 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MYDGFQ969H8 173 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 KTI12Q96EK9 354 aaPredicted RBP6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LRR1Q96L50 414 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MRGPRX4Q96LA9 322 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FRMD6Q96NE9 622 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MOGAT1Q96PD6 335 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 COPS4Q9BT78 406 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NDEL1Q9GZM8 345 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FAM192AQ9GZU8 254 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LHPPQ9H008 270 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ENKD1Q9H0I2 346 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FKRPQ9H9S5 495 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MCCC2Q9HCC0 563 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SH2D2AQ9NP31 389 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 AMBNQ9NP70 447 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NANSQ9NR45 359 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CNOT2Q9NZN8 540 aaKnown RBP6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NDUFA13Q9P0J0 144 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ABI3Q9P2A4 366 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ERVK-18Q9QC07 812 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PSORS1C1Q9UIG5 152 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MED13Q9UHV7 2174 aa6.93□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PTPRZ1P23471 2315 aaPredicted RBP6.92□□□□□ -1.3
SCARNA20.1-201ENST00000516009 A0A087WZY1 265 aa6.92□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TMEM72A0PK05 275 aa6.92□□□□□ -1.3
SCARNA20.1-201ENST00000516009 RIIAD1A6NNX1 92 aa6.92□□□□□ -1.3
SCARNA20.1-201ENST00000516009 KDM4EB2RXH2 506 aaPredicted RBP6.92□□□□□ -1.3
SCARNA20.1-201ENST00000516009 B4DXG7 233 aa6.92□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ETV2O00321 342 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms