RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 A0A1W2PQU0 124 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 IGLON5A6NGN9 336 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 A6NIZ1 184 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 MAGEB4O15481 346 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 SEC14L5O43304 696 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 LATO43561 262 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 HOXA11P31270 313 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 RAP1BP61224 184 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 RAP1AP62834 184 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 RACK1P63244 317 aaKnown RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 ENTPD8Q5MY95 495 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 CNTN4Q8IWV2 1026 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 OR52H1Q8NGJ2 320 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 SCARB1Q8WTV0 552 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 MARC2Q969Z3 335 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 MIB2Q96AX9 1013 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 TRBV4-1A0A0J9YWV2 114 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 FTCDNL1E5RQL4 147 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 SHC1P29353 583 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 HTRA4P83105 476 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-214ENST00000515035 ZNF100Q8IYN0 542 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 PLPP5Q8NEB5 264 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 OR5L2Q8NGL0 311 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 CRYGNQ8WXF5 182 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 C22orf15Q8WYQ4 148 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 KCMF1Q9P0J7 381 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 A0A0U1RQS6 177 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 APBB3O95704 486 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 F3P13726 295 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 IL4RP24394 825 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 RPS18P62269 152 aaKnown RBP12.42□□□□□ -0.42
TCOF1-214ENST00000515035 TSPAN31Q12999 210 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 SYPL1Q16563 259 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 OR5AR1Q8NGP9 310 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 ADAMTS18Q8TE60 1221 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 HAPLN2Q9GZV7 340 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 HHATLQ9HCP6 504 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 CPNE7Q9UBL6 633 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 SLC9B1P1A6NJY1 282 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 SOCS6O14544 535 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 SLC16A6O15403 523 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 LAMTOR5O43504 91 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 ZDHHC11BP0C7U3 371 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 MTNR1BP49286 362 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 CCR6P51684 374 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 ADAM5Q6NVV9 412 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 H3F3CQ6NXT2 135 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 TRAPPC6BQ86SZ2 158 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 HAO2Q9NYQ3 351 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 VSX1Q9NZR4 365 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-214ENST00000515035 NENFQ9UMX5 172 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 MYH3P11055 1940 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 C1QBP02746 253 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 CLEC2LP0C7M8 214 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 PTGER1P34995 402 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 HBA1P69905 142 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 C1orf61Q13536 156 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 ELOCQ15369 112 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 EXOSC6Q5RKV6 272 aaKnown RBP12.42□□□□□ -0.42
TCOF1-214ENST00000515035 OR4K15Q8NH41 348 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 DIO2Q92813 273 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 SPATA6Q9NWH7 488 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-214ENST00000515035 SDHAF2Q9NX18 166 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 ACTL7AQ9Y615 435 aa12.42□□□□□ -0.42
TCOF1-214ENST00000515035 ARID1BQ8NFD5 2236 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-214ENST00000515035 MSTNO14793 375 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 OR2T1O43869 369 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 CD276Q5ZPR3 534 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 CBARPQ8N350 705 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-214ENST00000515035 ST8SIA4Q92187 359 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 CDS1Q92903 461 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 MR1Q95460 341 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 RAB39BQ96DA2 213 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 UFSP2Q9NUQ7 469 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 TCRBV21S2A2A0A5A6 115 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 CA3P07451 260 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 CST5P28325 142 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-214ENST00000515035 ACSM1Q08AH1 577 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 GPR18Q14330 331 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 NSDHLQ15738 373 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 STK11Q15831 433 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 HENMT1Q5T8I9 393 aaKnown RBP12.41□□□□□ -0.42
TCOF1-214ENST00000515035 OR7E24Q6IFN5 339 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.41□□□□□ -0.42
TCOF1-214ENST00000515035 LSMEM2Q8N112 164 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 PHOSPHO2Q8TCD6 241 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 GHSRQ92847 366 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 SGK3Q96BR1 496 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 PAAF1Q9BRP4 392 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 NIPSNAP3BQ9BS92 247 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 PAPOLGQ9BWT3 736 aaKnown RBP12.41□□□□□ -0.42
TCOF1-214ENST00000515035 OR11A1Q9GZK7 315 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 TMEM269A0A1B0GVZ9 245 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 AGAP14A8MT82 685 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 SLC16A7O60669 478 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 HBE1P02100 147 aa12.41□□□□□ -0.42
TCOF1-214ENST00000515035 DAP3P51398 398 aaKnown RBP12.41□□□□□ -0.42
TCOF1-214ENST00000515035 SUOXP51687 545 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms