RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 RRM2P31350 389 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 PTGER4P35408 488 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 ADH7P40394 386 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 SMSP52788 366 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 CRISP3P54108 245 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 GABARAPL2P60520 117 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 TEKQ02763 1124 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 CHRNEQ04844 493 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 GANABQ14697 944 aaKnown RBP7.53□□□□□ -1.2
CCL28-204ENST00000514421 GPR68Q15743 365 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 ZNF141Q15928 474 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 GPAT3Q53EU6 434 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 ANKRD34AQ69YU3 496 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 TYW3Q6IPR3 259 aaKnown RBP7.53□□□□□ -1.2
CCL28-204ENST00000514421 LAIR2Q6ISS4 152 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 ZNF585AQ6P3V2 769 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 CD163Q86VB7 1156 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 TSPYL5Q86VY4 417 aaPredicted RBP7.53□□□□□ -1.2
CCL28-204ENST00000514421 KRT73Q86Y46 540 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 PM20D2Q8IYS1 436 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 OR5M9Q8NGP3 310 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 B4GALNT2Q8NHY0 566 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 PHOSPHO1Q8TCT1 267 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 GIPC3Q8TF64 312 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 DGCR14Q96DF8 476 aaKnown RBP7.53□□□□□ -1.2
CCL28-204ENST00000514421 C1GALT1C1Q96EU7 318 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 HRASLS5Q96KN8 279 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 ZNF350Q9GZX5 532 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 SLC38A1Q9H2H9 487 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 CXorf56Q9H5V9 222 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 RUBCNLQ9H714 662 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 PDP1Q9P0J1 537 aaPredicted RBP7.53□□□□□ -1.2
CCL28-204ENST00000514421 SPRR3Q9UBC9 169 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 TNFRSF10DQ9UBN6 386 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 WDR45Q9Y484 360 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 U3KQV3 271 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 ICE1Q9Y2F5 2266 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 DOPEY1Q5JWR5 2465 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 USP9YO00507 2555 aaPredicted RBP7.53□□□□□ -1.2
CCL28-204ENST00000514421 FREM3P0C091 2139 aa7.52□□□□□ -1.2
CCL28-204ENST00000514421 NPIPA5A0A0B4J1W7 369 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 A0A1W2PRQ8 180 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 SERINC4A6NH21 518 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 FIGNL2A6NMB9 653 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 C17orf51A8MQB3 221 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 B4DXG7 233 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 NPIPA7E9PJI5 369 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 ZNF701M0R085 212 aaPredicted RBP7.52□□□□□ -1.21
CCL28-204ENST00000514421 TNFRSF11BO00300 401 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 HCRTR2O43614 444 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 MRPS14O60783 128 aaKnown RBP7.52□□□□□ -1.21
CCL28-204ENST00000514421 UGT2B17O75795 530 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 DIRAS1O95057 198 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 ZIC2O95409 532 aaPredicted RBP7.52□□□□□ -1.21
CCL28-204ENST00000514421 CLIC3O95833 236 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 EPPINO95925 133 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 LGI1O95970 557 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 NPIPA8P0DM63 369 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 PEPDP12955 493 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 CPN1P15169 458 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 CBLP22681 906 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 CRHBPP24387 322 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 STARP49675 285 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 SMIM11AP58511 58 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 HPCAP84074 193 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 CRYZQ08257 329 aaKnown RBP7.52□□□□□ -1.21
CCL28-204ENST00000514421 NPRL3Q12980 569 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 TOP3AQ13472 1001 aaPredicted RBP7.52□□□□□ -1.21
CCL28-204ENST00000514421 DGCR6Q14129 220 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 BCL2A1Q16548 175 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 SYPL1Q16563 259 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 ZIK1Q3SY52 487 aaPredicted RBP7.52□□□□□ -1.21
CCL28-204ENST00000514421 RPS26P11Q5JNZ5 115 aaPredicted RBP7.52□□□□□ -1.21
CCL28-204ENST00000514421 C6orf141Q5SZD1 244 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 PDZK1Q5T2W1 519 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 DHRS4L2Q6PKH6 230 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 XKRXQ6PP77 449 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 CD300LDQ6UXZ3 194 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 RPTNQ6XPR3 784 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 C3P1Q6ZMU1 363 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 OLIG3Q7RTU3 272 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 MRGPRGQ86SM5 289 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 SATL1Q86VE3 508 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 OFCC1Q8IZS5 231 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 ZNF619Q8N2I2 560 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 ZNF786Q8N393 782 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 ZNF614Q8N883 585 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 GATSQ8NAP1 163 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 SETD9Q8NE22 299 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 PHF10Q8WUB8 498 aaKnown RBP7.52□□□□□ -1.21
CCL28-204ENST00000514421 PROX1Q92786 737 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 ZG16BQ96DA0 208 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 WDYHV1Q96HA8 205 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 CCDC120Q96HB5 630 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 SH3YL1Q96HL8 342 aaPredicted RBP7.52□□□□□ -1.21
CCL28-204ENST00000514421 SFXN2Q96NB2 322 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 DMRTA2Q96SC8 542 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 TUBA1CQ9BQE3 449 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 PIGQQ9BRB3 760 aa7.52□□□□□ -1.21
CCL28-204ENST00000514421 PINK1Q9BXM7 581 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms