RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SLC7A8Q9UHI5 535 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 RPS6KA6Q9UK32 745 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 MEMO1Q9Y316 297 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 ARHGAP21Q5T5U3 1957 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 MPDZO75970 2070 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 HIVEP3Q5T1R4 2406 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 MYO18BQ8IUG5 2567 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 POLEQ07864 2286 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 COL12A1Q99715 3063 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 TCRBV5S2A0A599 114 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 ELOA3DA6NLF2 546 aaPredicted RBP8.79□□□□□ -1
TOPBP1-209ENST00000513818 LRRN3E7EW58 273 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 PIP5K1CO60331 668 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 WDR1O75083 606 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 TOXO94900 526 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 IFNW1P05000 195 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 GLI4P10075 376 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 IMPDH2P12268 514 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 CBLP22681 906 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 APOBEC1P41238 236 aaKnown RBP8.79□□□□□ -1
TOPBP1-209ENST00000513818 ADORA2A-AS1P86434 159 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 VLDLRP98155 873 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 MYBPHQ13203 477 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 PIN1Q13526 163 aaPredicted RBP8.79□□□□□ -1
TOPBP1-209ENST00000513818 SGCBQ16585 318 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.79□□□□□ -1
TOPBP1-209ENST00000513818 ELOA3BQ3SY89 546 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 C4orf17Q53FE4 359 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 PGM2L1Q6PCE3 622 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 B3GNT6Q6ZMB0 384 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 ESPNLQ6ZVH7 1005 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 P4HA3Q7Z4N8 544 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 GDF7Q7Z4P5 450 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 TSEN54Q7Z6J9 526 aaKnown RBP8.79□□□□□ -1
TOPBP1-209ENST00000513818 DHFR2Q86XF0 187 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 MEX3DQ86XN8 651 aaKnown RBP8.79□□□□□ -1
TOPBP1-209ENST00000513818 CCDC71Q8IV32 467 aaPredicted RBP8.79□□□□□ -1
TOPBP1-209ENST00000513818 PM20D2Q8IYS1 436 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 GCNT2Q8N0V5 402 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 ARHGAP24Q8N264 748 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 LSMEM1Q8N8F7 131 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 NAXEQ8NCW5 288 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 ELOA3Q8NG57 546 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 ROBO4Q8WZ75 1007 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 ASB9Q96DX5 294 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 SLC41A3Q96GZ6 507 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 PYURFQ96I23 114 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 DMRTA2Q96SC8 542 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 SEPHS2Q99611 448 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 SERINC1Q9NRX5 453 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 ACTR3BQ9P1U1 418 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 CLCF1Q9UBD9 225 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 SLC7A7Q9UM01 511 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 CLEC4AQ9UMR7 237 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 A4GNTQ9UNA3 340 aa8.79□□□□□ -1
TOPBP1-209ENST00000513818 SAMD4AQ9UPU9 718 aaKnown RBP8.79□□□□□ -1
TOPBP1-209ENST00000513818 SPIN1Q9Y657 262 aaPredicted RBP8.79□□□□□ -1
TOPBP1-209ENST00000513818 TRAPPC13A5PLN9 417 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 SLC22A20A6NK97 555 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 ZNF814B7Z6K7 855 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 LINC01387J3KSC0 135 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 ACOT8O14734 319 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 CHP2O43745 196 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 FMO6PO60774 539 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 ZG16O60844 167 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 ATP5HO75947 161 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 AQP8O94778 261 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 AGFG2O95081 481 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 SEMG1P04279 462 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 GABRA1P14867 456 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 HTR3AP46098 478 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 RPS5P46782 204 aaKnown RBP8.78□□□□□ -1
TOPBP1-209ENST00000513818 DIO1P49895 249 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 AGFG1P52594 562 aaKnown RBP8.78□□□□□ -1
TOPBP1-209ENST00000513818 UGT2B15P54855 530 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 OR2B6P58173 313 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 RPS3AP61247 264 aaKnown RBP8.78□□□□□ -1
TOPBP1-209ENST00000513818 SIRPAP78324 504 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 EGR4Q05215 589 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 PMPCAQ10713 525 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 FLOT2Q14254 428 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 TRIM25Q14258 630 aaKnown RBP8.78□□□□□ -1
TOPBP1-209ENST00000513818 CDSNQ15517 529 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 BCL2A1Q16548 175 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 SPATS1Q496A3 300 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 ASRGL1Q7L266 308 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 CHMP1BQ7LBR1 199 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 SPATA24Q86W54 205 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 NKAIN4Q8IVV8 208 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 EID3Q8N140 333 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 ZPLD1Q8TCW7 415 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 SLC25A43Q8WUT9 341 aaPredicted RBP8.78□□□□□ -1
TOPBP1-209ENST00000513818 TMEM255BQ8WV15 326 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 OSTF1Q92882 214 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 UTP4Q969X6 686 aaKnown RBP8.78□□□□□ -1
TOPBP1-209ENST00000513818 KTI12Q96EK9 354 aaPredicted RBP8.78□□□□□ -1
TOPBP1-209ENST00000513818 SLC47A1Q96FL8 570 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 PRRC1Q96M27 445 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 LRGUKQ96M69 825 aa8.78□□□□□ -1
TOPBP1-209ENST00000513818 USB1Q9BQ65 265 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms