RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 GIN1Q9NXP7 522 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 DTNAQ9Y4J8 743 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 TRAV20A0A0B4J274 112 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 IGHV1-18A0A0C4DH31 117 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 PDPK1O15530 556 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 ZNF264O43296 627 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 SUPT7LO94864 414 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 TFP02787 698 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 PROCP04070 461 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 ANPEPP15144 967 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 MAGEA8P43361 318 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 ATP12AP54707 1039 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 EXOSC6Q5RKV6 272 aaKnown RBP10.02□□□□□ -0.8
RNF4-216ENST00000511859 AGBL2Q5U5Z8 902 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 FAM219BQ5XKK7 198 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 ANKRD16Q6P6B7 361 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 VHLLQ6RSH7 139 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 SZRD1Q7Z422 152 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 TMEM151AQ8N4L1 468 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 ZDHHC22Q8N966 263 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 ANKRD42Q8N9B4 389 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 NUP37Q8NFH4 326 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 RFWD2Q8NHY2 731 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 FBXO30Q8TB52 745 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 TCP10LQ8TDR4 215 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 TMEM234Q8WY98 164 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 TLCD1Q96CP7 247 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 C16orf58Q96GQ5 468 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 ATP6V1G3Q96LB4 118 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 ANKRD27Q96NW4 1050 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 ZNF442Q9H7R0 627 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 NTN4Q9HB63 628 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 MOV10Q9HCE1 1003 aaKnown RBP10.02□□□□□ -0.8
RNF4-216ENST00000511859 SLC7A10Q9NS82 523 aa10.02□□□□□ -0.8
RNF4-216ENST00000511859 POM121CA8CG34 1229 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 A8MT66 165 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 hCG_2039718K7EN88 272 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 KLF11O14901 512 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 TYROBPO43914 113 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 PLIN3O60664 434 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 DNAJA2O60884 412 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 PMS2P2O95744 297 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 ENO1P06733 434 aaKnown RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 ARAFP10398 606 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 MYL2P10916 166 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 TAC1P20366 129 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 CLK1P49759 484 aaKnown RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 HTR6P50406 440 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 MPP2Q14168 576 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 ADRM1Q16186 407 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 CASP12Q6UXS9 341 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 CNPY4Q8N129 248 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 ZCCHC24Q8N2G6 241 aaKnown RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 CLDND2Q8NHS1 167 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 MGARPQ8TDB4 240 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 JADE3Q92613 823 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 ZNF764Q96H86 408 aaPredicted RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 MECRQ9BV79 373 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 RACGAP1Q9H0H5 632 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 PIGUQ9H490 435 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 SLC52A3Q9NQ40 469 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 MED29Q9NX70 200 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 SLC9A8Q9Y2E8 581 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 STK38LQ9Y2H1 464 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 HDGFL3Q9Y3E1 203 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 SPIN1Q9Y657 262 aaPredicted RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 G3V2L1 256 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 GAAP10253 952 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 TFPIP10646 304 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 CPA3P15088 417 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 NPR2P20594 1047 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 APOBEC1P41238 236 aaKnown RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 GPR6P46095 362 aaPredicted RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 CCR4P51679 360 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 PKNOX1P55347 436 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 SESN3P58005 492 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 UBA52P62987 128 aaKnown RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 H3F3AP84243 136 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 NAAAQ02083 359 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 POU3F1Q03052 451 aaPredicted RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 MERTKQ12866 999 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 CCDC153Q494R4 210 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 UNC50Q53HI1 259 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 ZNF678Q5SXM1 525 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.01□□□□□ -0.81
RNF4-216ENST00000511859 TSPO2Q5TGU0 170 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 NOXRED1Q6NXP6 359 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 C1orf229Q6ZS94 237 aaPredicted RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 ABHD12BQ7Z5M8 362 aaPredicted RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 LCA5Q86VQ0 697 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 CCDC103Q8IW40 242 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 BPIFB2Q8N4F0 458 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 TMCO5AQ8N6Q1 288 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 POMGNT2Q8NAT1 580 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 CIDECQ96AQ7 238 aaPredicted RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 ARL5BQ96KC2 179 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 PKNOX2Q96KN3 472 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 PAIP2Q9BPZ3 127 aaKnown RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 THUMPD3Q9BV44 507 aaKnown RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 LAT2Q9GZY6 243 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms