RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, human

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-233	ENST00000510756	PLCZ1	Q86YW0	608 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	GID4	Q8IVV7	300 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	SCAI	Q8N9R8	606 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	ADPRHL1	Q8NDY3	354 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	THAP3	Q8WTV1	239 aa	Predicted RBP	11.13	□□□□□ -0.63
CAST-233	ENST00000510756	SNX18	Q96RF0	628 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	PLA2G12A	Q9BZM1	189 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	LIN28A	Q9H9Z2	209 aa	Known RBP	11.13	□□□□□ -0.63
CAST-233	ENST00000510756	FANCF	Q9NPI8	374 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	CMC2	Q9NRP2	79 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	TMED7	Q9Y3B3	224 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	CORIN	Q9Y5Q5	1042 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	USP34	Q70CQ2	3546 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	FAM20B	O75063	409 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	SLC25A12	O75746	678 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	SOX14	O95416	240 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	TXNDC12	O95881	172 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	IFNG	P01579	166 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	PEPD	P12955	493 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	FUT1	P19526	365 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	CASR	P41180	1078 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	ZNF41	P51814	821 aa	Predicted RBP	11.12	□□□□□ -0.63
CAST-233	ENST00000510756	LSM11	P83369	360 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
CAST-233	ENST00000510756	FOXK2	Q01167	660 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	ATP1A4	Q13733	1029 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.12	□□□□□ -0.63	1e-8	■■□□□ 14.3
CAST-233	ENST00000510756	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.12	□□□□□ -0.63
CAST-233	ENST00000510756		Q6ZPB1	254 aa	Predicted RBP	11.12	□□□□□ -0.63
CAST-233	ENST00000510756	ADGRG3	Q86Y34	549 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	CCDC103	Q8IW40	242 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	ALDH16A1	Q8IZ83	802 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	BPIFB6	Q8NFQ5	453 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	RNF31	Q96EP0	1072 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	C1GALT1C1	Q96EU7	318 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	JAM3	Q9BX67	310 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	CDCA4	Q9BXL8	241 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	DSN1	Q9H410	356 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	EGLN3	Q9H6Z9	239 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	MCCC2	Q9HCC0	563 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	SERINC1	Q9NRX5	453 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
CAST-233	ENST00000510756	PCSK5	Q92824	1860 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	TRIM3	O75382	744 aa	Predicted RBP	11.12	□□□□□ -0.63
CAST-233	ENST00000510756	BGLAP	P02818	100 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	CDK1	P06493	297 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	UQCRC1	P31930	480 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	FXYD6P3	P58550	94 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	EGR4	Q05215	589 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	SNAPC1	Q16533	368 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	ZNF239	Q16600	458 aa	Known RBP	11.12	□□□□□ -0.63
CAST-233	ENST00000510756	PLPPR5	Q32ZL2	321 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	KLHL22	Q53GT1	634 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	FAM69A	Q5T7M9	428 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	NXNL2	Q5VZ03	156 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	DESI1	Q6ICB0	168 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	MAMDC2	Q7Z304	686 aa	Predicted RBP	11.12	□□□□□ -0.63
CAST-233	ENST00000510756	SPART	Q8N0X7	666 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	OR4Q3	Q8NH05	313 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	MFSD8	Q8NHS3	518 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	CRELD1	Q96HD1	420 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.12	□□□□□ -0.63
CAST-233	ENST00000510756	SAMD8	Q96LT4	415 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	BCL7B	Q9BQE9	202 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	CHRNA9	Q9UGM1	479 aa		11.12	□□□□□ -0.63
CAST-233	ENST00000510756	KNTC1	P50748	2209 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	DPPA5	A6NC42	116 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	LINC01387	J3KSC0	135 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	SUSD5	O60279	629 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	CELA2A	P08217	269 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	DSCR4	P56555	118 aa	Predicted RBP	11.11	□□□□□ -0.63
CAST-233	ENST00000510756	ZP4	Q12836	540 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	TBCE	Q15813	527 aa	Predicted RBP	11.11	□□□□□ -0.63
CAST-233	ENST00000510756	AADACL4	Q5VUY2	407 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	GPR139	Q6DWJ6	353 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	EGFL6	Q8IUX8	553 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.11	□□□□□ -0.63
CAST-233	ENST00000510756	CLEC1A	Q8NC01	280 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	ZNF540	Q8NDQ6	660 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	OR13C2	Q8NGS9	318 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	RNF217	Q8TC41	542 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	DDIT4L	Q96D03	193 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	PLEKHA8	Q96JA3	519 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	TIMMDC1	Q9NPL8	285 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	NRIP3	Q9NQ35	241 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	NANS	Q9NR45	359 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	TVP23B	Q9NYZ1	205 aa		11.11	□□□□□ -0.63
CAST-233	ENST00000510756	CBR3	O75828	277 aa		11.1	□□□□□ -0.63
CAST-233	ENST00000510756	NUDT14	O95848	222 aa		11.1	□□□□□ -0.63
CAST-233	ENST00000510756		P04436	131 aa		11.1	□□□□□ -0.63
CAST-233	ENST00000510756	HK1	P19367	917 aa		11.1	□□□□□ -0.63
CAST-233	ENST00000510756	EEF1B2	P24534	225 aa	Known RBP	11.1	□□□□□ -0.63
CAST-233	ENST00000510756	FMO3	P31513	532 aa		11.1	□□□□□ -0.63
CAST-233	ENST00000510756	CYB561	P49447	251 aa		11.1	□□□□□ -0.63
CAST-233	ENST00000510756	RNF144A	P50876	292 aa	Predicted RBP	11.1	□□□□□ -0.63
CAST-233	ENST00000510756	RAB40B	Q12829	278 aa		11.1	□□□□□ -0.63
CAST-233	ENST00000510756	SELENBP1	Q13228	472 aa		11.1	□□□□□ -0.63
CAST-233	ENST00000510756	IRF3	Q14653	427 aa		11.1	□□□□□ -0.63
CAST-233	ENST00000510756	SGCB	Q16585	318 aa		11.1	□□□□□ -0.63
CAST-233	ENST00000510756	SYT14P1	Q58G82	188 aa		11.1	□□□□□ -0.63
CAST-233	ENST00000510756	TMEM236	Q5W0B7	351 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms