RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 PIK3R3Q92569 461 aa8.11□□□□□ -1.11
PTPN20-223ENST00000509900 RAB8BQ92930 207 aa8.11□□□□□ -1.11
PTPN20-223ENST00000509900 SLC30A2Q9BRI3 323 aa8.11□□□□□ -1.11
PTPN20-223ENST00000509900 LMF2Q9BU23 707 aaKnown RBP8.11□□□□□ -1.11
PTPN20-223ENST00000509900 PRDM13Q9H4Q3 707 aa8.11□□□□□ -1.11
PTPN20-223ENST00000509900 MARCH7Q9H992 704 aa8.11□□□□□ -1.11
PTPN20-223ENST00000509900 PPANQ9NQ55 473 aaKnown RBP8.11□□□□□ -1.11
PTPN20-223ENST00000509900 SEC14L4Q9UDX3 406 aa8.11□□□□□ -1.11
PTPN20-223ENST00000509900 LEF1Q9UJU2 399 aaPredicted RBP8.11□□□□□ -1.11
PTPN20-223ENST00000509900 PURGQ9UJV8 347 aaKnown RBP8.11□□□□□ -1.11
PTPN20-223ENST00000509900 C19orf53Q9UNZ5 99 aaPredicted RBP8.11□□□□□ -1.11
PTPN20-223ENST00000509900 REXO2Q9Y3B8 237 aaKnown RBP8.11□□□□□ -1.11
PTPN20-223ENST00000509900 WIPI2Q9Y4P8 454 aa8.11□□□□□ -1.11
PTPN20-223ENST00000509900 PCDHGB5Q9Y5G0 923 aa8.11□□□□□ -1.11
PTPN20-223ENST00000509900 RYR1P21817 5038 aa8.11□□□□□ -1.11
PTPN20-223ENST00000509900 CSMD3Q7Z407 3707 aa8.11□□□□□ -1.11
PTPN20-223ENST00000509900 HERC2O95714 4834 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 A0A087WV62 115 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 IGHV2OR16-5A0A0B4J2B6 119 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 TRIM49D1C9J1S8 452 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 NR5A2O00482 541 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 GPR171O14626 319 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 S100BP04271 92 aaPredicted RBP8.1□□□□□ -1.11
PTPN20-223ENST00000509900 TPM1P09493 284 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 GABRA3P34903 492 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 ASMTP46597 345 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 EVX1P49640 407 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 SLC16A1P53985 500 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 TPM4P67936 248 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 SNTB2Q13425 540 aaKnown RBP8.1□□□□□ -1.11
PTPN20-223ENST00000509900 SLC29A2Q14542 456 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 MAD2L1BPQ15013 274 aaPredicted RBP8.1□□□□□ -1.11
PTPN20-223ENST00000509900 OTUD3Q5T2D3 398 aaPredicted RBP8.1□□□□□ -1.11
PTPN20-223ENST00000509900 CBLN3Q6UW01 205 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 ZNF771Q7L3S4 317 aaPredicted RBP8.1□□□□□ -1.11
PTPN20-223ENST00000509900 MTDHQ86UE4 582 aaKnown RBP8.1□□□□□ -1.11
PTPN20-223ENST00000509900 IGDCC3Q8IVU1 814 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 GSPT2Q8IYD1 628 aaKnown RBP8.1□□□□□ -1.11
PTPN20-223ENST00000509900 FAM9CQ8IZT9 166 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 EXOSC8Q96B26 276 aaKnown RBP8.1□□□□□ -1.11
PTPN20-223ENST00000509900 POPDC3Q9HBV1 291 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 AHSPQ9NZD4 102 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 SENP1Q9P0U3 644 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 CMAHPQ9Y471 501 aa8.1□□□□□ -1.11
PTPN20-223ENST00000509900 TRAPPC2LH3BP13 241 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 UPK1AO00322 258 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 TRAF3IP2O43734 574 aaPredicted RBP8.09□□□□□ -1.11
PTPN20-223ENST00000509900 UGDHO60701 494 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 KCNH1O95259 989 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 NUDT14O95848 222 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 PLATP00750 562 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 IGKV3-15P01624 115 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 NAT2P11245 290 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 CD69Q07108 199 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 DAG1Q14118 895 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 DEFB112Q30KQ8 113 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 SLC25A53Q5H9E4 307 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 CASC10Q5T4H9 136 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 FOXB2Q5VYV0 432 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 KRT80Q6KB66 452 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 TMPPEQ6ZT21 453 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 LRP11Q86VZ4 500 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 CNGA4Q8IV77 575 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 MISPQ8IVT2 679 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 VSTM4Q8IW00 320 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 CCDC103Q8IW40 242 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 CCDC170Q8IYT3 715 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 SAMD14Q8IZD0 417 aaPredicted RBP8.09□□□□□ -1.11
PTPN20-223ENST00000509900 SYCE1Q8N0S2 351 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 PARP8Q8N3A8 854 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 L3MBTL4Q8NA19 623 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 ARL5BQ96KC2 179 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 RBBP8Q99708 897 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 SYT3Q9BQG1 590 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 FAIM2Q9BWQ8 316 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 NUDT4Q9NZJ9 180 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 MYEF2Q9P2K5 600 aaKnown RBP8.09□□□□□ -1.11
PTPN20-223ENST00000509900 ACOT9Q9Y305 439 aa8.09□□□□□ -1.11
PTPN20-223ENST00000509900 DNAH7Q8WXX0 4024 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 ARPC4-TTLL3A0A0A6YYG9 625 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 UBXN8O00124 270 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 SULT2B1O00204 365 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 ZNF12P17014 697 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 RAD52P43351 418 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 MAGEB1P43366 347 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 ATP6V0D1P61421 351 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 DBPQ10586 325 aaPredicted RBP8.08□□□□□ -1.12
PTPN20-223ENST00000509900 C3orf33Q6P1S2 294 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 TMEM107Q6UX40 140 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 OR2L13Q8N349 312 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 FAM169BQ8N8A8 192 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 NAT8LQ8N9F0 302 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 OR1K1Q8NGR3 316 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 GPR119Q8TDV5 335 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 BCL2L2Q92843 193 aaPredicted RBP8.08□□□□□ -1.12
PTPN20-223ENST00000509900 MARS2Q96GW9 593 aaKnown RBP8.08□□□□□ -1.12
PTPN20-223ENST00000509900 QRSL1Q9H0R6 528 aaKnown RBP8.08□□□□□ -1.12
PTPN20-223ENST00000509900 NELFAQ9H3P2 528 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 ZNF385DQ9H6B1 395 aa8.08□□□□□ -1.12
PTPN20-223ENST00000509900 CAB39LQ9H9S4 337 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms