RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 PRIMA1Q86XR5 153 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 VRK2Q86Y07 508 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 MSRB3Q8IXL7 192 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 CMIPQ8IY22 773 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 ARFGAP2Q8N6H7 521 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 GLB1L3Q8NCI6 653 aaPredicted RBP11.75□□□□□ -0.53
SDHA-210ENST00000509420 AMBRA1Q9C0C7 1298 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.75□□□□□ -0.53
SDHA-210ENST00000509420 MALT1Q9UDY8 824 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 LAMP3Q9UQV4 416 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 LIPT1Q9Y234 373 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 TMED7Q9Y3B3 224 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 HDGFL3Q9Y3E1 203 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 ALPK2Q86TB3 2170 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 ABCA1O95477 2261 aa11.75□□□□□ -0.53
SDHA-210ENST00000509420 OR5H1A6NKK0 313 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 KLF11O14901 512 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 ZNF208O43345 1280 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 NPIPB7O75200 414 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 NDUFS7O75251 213 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 SLC22A3O75751 556 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 IDO1P14902 403 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 CCNA2P20248 432 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 TACR3P29371 465 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 ADSLP30566 484 aaPredicted RBP11.74□□□□□ -0.53
SDHA-210ENST00000509420 SLC1A3P43003 542 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 MRPL19P49406 292 aaKnown RBP11.74□□□□□ -0.53
SDHA-210ENST00000509420 CLK1P49759 484 aaKnown RBP11.74□□□□□ -0.53
SDHA-210ENST00000509420 CSNK2A1P68400 391 aaPredicted RBP11.74□□□□□ -0.53
SDHA-210ENST00000509420 SLC17A1Q14916 467 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 RPS26P11Q5JNZ5 115 aaPredicted RBP11.74□□□□□ -0.53
SDHA-210ENST00000509420 FBXW9Q5XUX1 488 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 ALKBH2Q6NS38 261 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 ZNF621Q6ZSS3 439 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 FUNDC1Q8IVP5 155 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 CLIP4Q8N3C7 705 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 WDR31Q8NA23 367 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 SLC38A5Q8WUX1 472 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 TMEM171Q8WVE6 324 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 WDR60Q8WVS4 1066 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 GTF2H4Q92759 462 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 ARL8AQ96BM9 186 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 PAIP1Q9H074 479 aaKnown RBP11.74□□□□□ -0.53
SDHA-210ENST00000509420 MANSC1Q9H8J5 431 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 MTHFD2LQ9H903 347 aaPredicted RBP11.74□□□□□ -0.53
SDHA-210ENST00000509420 SERINC1Q9NRX5 453 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 SLC25A37Q9NYZ2 338 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 ZIM2Q9NZV7 527 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 TRAPPC4Q9Y296 219 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 FLVCR1Q9Y5Y0 555 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 SLC25A15Q9Y619 301 aa11.74□□□□□ -0.53
SDHA-210ENST00000509420 TRPC5OSA6NMA1 111 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 RFXANKO14593 260 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 SMAD7O15105 426 aaKnown RBP11.73□□□□□ -0.53
SDHA-210ENST00000509420 CLOCKO15516 846 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 TMCC2O75069 709 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 FZD7O75084 574 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 IGHV4-39P01824 125 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 CD3EP07766 207 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 GKN3PP0CG01 181 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 TFPIP10646 304 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 BMP2P12643 396 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 POLR2HP52434 150 aaKnown RBP11.73□□□□□ -0.53
SDHA-210ENST00000509420 TXNL4AP83876 142 aaKnown RBP11.73□□□□□ -0.53
SDHA-210ENST00000509420 TNK1Q13470 666 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 PPA1Q15181 289 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 GABRA6Q16445 453 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 TIMM23BQ5SRD1 257 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 EPGNQ6UW88 154 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 B3GLCTQ6Y288 498 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 CROCCP2Q86T23 111 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 DTX2Q86UW9 622 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 OR52E4Q8NGH9 312 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 ZNF563Q8TA94 476 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 SMAP2Q8WU79 429 aaPredicted RBP11.73□□□□□ -0.53
SDHA-210ENST00000509420 PMM1Q92871 262 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 TRAF4Q9BUZ4 470 aaPredicted RBP11.73□□□□□ -0.53
SDHA-210ENST00000509420 TPT1P8Q9HAU6 139 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 FANCFQ9NPI8 374 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 STAB1Q9NY15 2570 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 TMEM181Q9P2C4 612 aa11.73□□□□□ -0.53
SDHA-210ENST00000509420 A0A096LNT2 108 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 UQCRHLA0A096LP55 91 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 TRBV5-3A0A0A0MS03 114 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 CFAP73A6NFT4 308 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 LIPT2A6NK58 231 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 TMEM229AB2RXF0 380 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 RAD51DO75771 328 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 IL6P05231 212 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 DBIP07108 87 aaKnown RBP11.72□□□□□ -0.53
SDHA-210ENST00000509420 CDKN1AP38936 164 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 MAGEA8P43361 318 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 RPS4XP62701 263 aaKnown RBP11.72□□□□□ -0.53
SDHA-210ENST00000509420 LRRC74AQ0VAA2 488 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 STK11Q15831 433 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 RNF220Q5VTB9 566 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 C11orf71Q6IPW1 123 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 MSANTD1Q6ZTZ1 278 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 TRIML2Q8N7C3 387 aa11.72□□□□□ -0.53
SDHA-210ENST00000509420 PIGXQ8TBF5 258 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms