RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 OR51J1Q9H342 316 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 HEBP1Q9NRV9 189 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 NDRG2Q9UN36 371 aaKnown RBP3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 DOCK5Q9H7D0 1870 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 PCNX1Q96RV3 2341 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 IGSF9BQ9UPX0 1349 aa3.19□□□□□ -1.9
TOPBP1-206ENST00000508524 AKAP9Q99996 3911 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 KIF26AQ9ULI4 1882 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 PLIN4Q96Q06 1357 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 GOLGA4Q13439 2230 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 MBLAC1A4D2B0 266 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 H3BMH7 237 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 TLR4O00206 839 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 LYPLA1O75608 230 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 HPNP05981 417 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 CSRP1P21291 193 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 ATP5DP30049 168 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 CA8P35219 290 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 MRPS6P82932 125 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 OC90Q02509 493 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 EBI3Q14213 229 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 ELAVL3Q14576 367 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 CYP51A1Q16850 503 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 ACSF3Q4G176 576 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 TFDP3Q5H9I0 405 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 METTL11BQ5VVY1 283 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 KRT77Q7Z794 578 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 YRDCQ86U90 279 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 SFRP1Q8N474 314 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 ST7LQ8TDW4 575 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 NOL4LQ96MY1 436 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 NICN1Q9BSH3 213 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 CNPY3Q9BT09 278 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 CARD6Q9BX69 1037 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 PTGES2Q9H7Z7 377 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 L3MBTL1Q9Y468 752 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 APCP25054 2843 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 EML5Q05BV3 1969 aa3.18□□□□□ -1.9
TOPBP1-206ENST00000508524 CABIN1Q9Y6J0 2220 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 A0A1W2PRQ8 180 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 A0A1W2PRV1 198 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 FMO6PO60774 539 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 RAMP1O60894 148 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 IGFBP1P08833 259 aaPredicted RBP3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 ALOX5P09917 674 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 ZNF18P17022 549 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 CASP3P42574 277 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 HNRNPA3P51991 378 aaKnown RBP3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 OTUD4Q01804 1114 aaKnown RBP3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 EGFEM1PQ0D2K5 195 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 ZNF674Q2M3X9 581 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 USH1GQ495M9 461 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 GPBP1Q86WP2 473 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 CENPSQ8N2Z9 138 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 CCDC71LQ8N9Z2 235 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 FBXO30Q8TB52 745 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 ITFG1Q8TB96 612 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 CBWD1Q9BRT8 395 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 TRIM4Q9C037 500 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 C2orf40Q9H1Z8 148 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 PRORYQ9H606 182 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 NANOGQ9H9S0 305 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 PXMP2Q9NR77 195 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 PNO1Q9NRX1 252 aaKnown RBP3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 RGS18Q9NS28 235 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 ONECUT1Q9UBC0 465 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 RAB26Q9ULW5 256 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 FZR1Q9UM11 496 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 FKBP7Q9Y680 259 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 ATRQ13535 2644 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 ICE1Q9Y2F5 2266 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 CSMD2Q7Z408 3487 aa3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 ANKHD1Q8IWZ3 2542 aaKnown RBP3.17□□□□□ -1.9
TOPBP1-206ENST00000508524 STAB1Q9NY15 2570 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 ARHGAP21Q5T5U3 1957 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 MUC22E2RYF6 1773 aaPredicted RBP3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 K7ENP7 123 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 STSP08842 583 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 MUTP22033 750 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 CXCL12P48061 93 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 IL9RQ01113 521 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 GALK2Q01415 458 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 SP4Q02446 784 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 LRRC63Q05C16 580 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 TSTA3Q13630 321 aaPredicted RBP3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 MPPED2Q15777 294 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 LIPKQ5VXJ0 399 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 LEG1Q6P5S2 330 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 FAM228AQ86W67 206 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 CCDC36Q8IYA8 594 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 LRRC43Q8N309 656 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 TMCO5AQ8N6Q1 288 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 ING5Q8WYH8 240 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 FGF13Q92913 245 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 HAVCR1Q96D42 359 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 DTD2Q96FN9 168 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 FTHL17Q9BXU8 183 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 TMEM117Q9H0C3 514 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 NT5C3AQ9H0P0 336 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 GLIPR2Q9H4G4 154 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms