RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SGCZQ96LD1 299 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 HOXD1Q9GZZ0 328 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ABCB9Q9NP78 766 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 VDAC3Q9Y277 283 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TIMM8BQ9Y5J9 83 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 A0A0B4J203 849 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 H0YIG0 161 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CLDN14O95500 239 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 LY86O95711 162 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 DHFRP00374 187 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PRSS56P0CW18 603 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 HOXB3P14651 431 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 RHCEP18577 417 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TACR1P25103 407 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 IL3RAP26951 378 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 POLR2JP52435 117 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 EMP3P54852 163 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ELLP55199 621 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PRKCDQ05655 676 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ARL16Q0P5N6 197 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 LCP2Q13094 533 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 BAMBIQ13145 260 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 POU4F3Q15319 338 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 IFI44LQ53G44 452 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 C1orf220Q5T0J3 134 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 OR2A2Q6IF42 318 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SLITRK4Q8IW52 837 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 UEVLDQ8IX04 471 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CPSF7Q8N684 471 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SCGB1C1Q8TD33 95 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MOAP1Q96BY2 351 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SLC47A1Q96FL8 570 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 FBXL20Q96IG2 436 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MARK4Q96L34 752 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 FIZ1Q96SL8 496 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TP63Q9H3D4 680 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PSAT1Q9Y617 370 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 C1orf226A1L170 272 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 J3QRK9 145 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CDK2AP1O14519 115 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PROCP04070 461 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZCCHC18P0CG32 403 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ANXA3P12429 323 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 GABRA1P14867 456 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MSR1P21757 451 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 BMP5P22003 454 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CD97P48960 835 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 F2RL1P55085 397 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 GNG2P59768 71 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PFN3P60673 137 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 RPS23P62266 143 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 EIF5AP63241 154 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PUDPQ08623 228 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 IKZF1Q13422 519 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 OR8B8Q15620 311 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 KLHL22Q53GT1 634 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ATPAF1Q5TC12 328 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 B3GNTL1Q67FW5 361 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 OR5M10Q6IEU7 315 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PAQR3Q6TCH7 311 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ELMOD2Q8IZ81 293 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 LRRC17Q8N6Y2 441 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 OR6Y1Q8NGX8 325 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MCFD2Q8NI22 146 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZFP90Q8TF47 636 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 NSMAFQ92636 917 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF570Q96NI8 536 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SLC46A1Q96NT5 459 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MICU1Q9BPX6 476 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 URM1Q9BTM9 101 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 NUDT9Q9BW91 350 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MROQ9BYG7 248 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 NXF5Q9H1B4 397 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SLC6A15Q9H2J7 730 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PRORYQ9H606 182 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 RNPEPL1Q9HAU8 725 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CNIH4Q9P003 139 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MAGEL2Q9UJ55 1249 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 POMT2Q9UKY4 750 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 B3GALT5Q9Y2C3 310 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 WBP11Q9Y2W2 641 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MMACHCQ9Y4U1 282 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 A0A1W2PP18 115 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 AURKAO14965 403 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PROM1O43490 865 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MPZL2O60487 215 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF780AO75290 641 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 BCAS1O75363 584 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 OR2J2O76002 312 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 OR4F21O95013 312 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CNIH1O95406 144 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SLC35E2BP0CK96 405 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SLC35E2P0CK97 266 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 HNRNPH3P31942 346 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 YAP1P46937 504 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZFP36L2P47974 494 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 BMXP51813 675 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CTSCP53634 463 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 DYRK1AQ13627 763 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 GAS6Q14393 721 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms