RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TMEM181Q9P2C4 612 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 OSGIN1Q9UJX0 560 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 NOSIPQ9Y314 301 aaKnown RBP11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 DSPPQ9NZW4 1301 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 TMED7-TICAM2A0A0A6YYA0 188 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 A0A1W2PP18 115 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 TMEM72A0PK05 275 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 TRPC5OSA6NMA1 111 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 INAFM1C9JVW0 142 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 FAAHO00519 579 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 ABCD4O14678 606 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 RAD51DO75771 328 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 CD8AP01732 235 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 CCNA2P20248 432 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 FKBP2P26885 142 aaKnown RBP11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 SLC1A3P43003 542 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 HTR3AP46098 478 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 POLR2HP52434 150 aaKnown RBP11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 MVDP53602 400 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 LRRC74AQ0VAA2 488 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 VEZF1Q14119 521 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 ETFDHQ16134 617 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 CLEC12BQ2HXU8 276 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 MRPL2Q5T653 305 aaKnown RBP11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 ZNF621Q6ZSS3 439 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 SSX8Q7RTT4 187 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 CROCCP2Q86T23 111 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 DTX2Q86UW9 622 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 PRIMA1Q86XR5 153 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 WDR60Q8WVS4 1066 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 MUCL1Q96DR8 90 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 TRMT61AQ96FX7 289 aaKnown RBP11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 MAELQ96JY0 434 aaKnown RBP11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 TRAF4Q9BUZ4 470 aaPredicted RBP11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 TRAPPC4Q9Y296 219 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 TMED7Q9Y3B3 224 aa11.46□□□□□ -0.57
HMGCS1-205ENST00000508319 COL6A5A8TX70 2615 aa11.46□□□□□ -0.58
HMGCS1-205ENST00000508319 ZC3H12DA2A288 527 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 CFAP73A6NFT4 308 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 PDLIM1O00151 329 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 GPR171O14626 319 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 ZNF208O43345 1280 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 IGHV4-39P01824 125 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 DBIP07108 87 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 KITP10721 976 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 IMPDH2P12268 514 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 TACR3P29371 465 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 ANXA11P50995 505 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 CDH11P55287 796 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 OR2B6P58173 313 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 SPOCK1Q08629 439 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 FAPQ12884 760 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 EPS8Q12929 822 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 PDCD4Q53EL6 469 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 DNM1P46Q6ZS02 220 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 MAVSQ7Z434 540 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 UBE2J2Q8N2K1 259 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 GLB1L3Q8NCI6 653 aaPredicted RBP11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 MGARPQ8TDB4 240 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 GTPBP3Q969Y2 492 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 DDIT4LQ96D03 193 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 ZBTB18Q99592 522 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 SLCO5A1Q9H2Y9 848 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 MTHFD2LQ9H903 347 aaPredicted RBP11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 RLIMQ9NVW2 624 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 ASB6Q9NWX5 421 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 TAS2R16Q9NYV7 291 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 CISD1Q9NZ45 108 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 FLVCR1Q9Y5Y0 555 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC25A15Q9Y619 301 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 ALPK2Q86TB3 2170 aa11.45□□□□□ -0.58
HMGCS1-205ENST00000508319 CHD3Q12873 2000 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 CDHR4A6H8M9 788 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 RNF223E7ERA6 249 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 RFXANKO14593 260 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 EIF1BO60739 113 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 NDUFS7O75251 213 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 MRPL33O75394 65 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 KRT75O95678 551 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 IL6P05231 212 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 ITGA5P08648 1049 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 NR2F1P10589 423 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 IDO1P14902 403 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 IL7RP16871 459 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 MAGEA8P43361 318 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 FOXG1P55316 489 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC35A1P78382 337 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 GNA13Q14344 377 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC17A1Q14916 467 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC9B1Q4ZJI4 515 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 CASP12Q6UXS9 341 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 ZNF836Q6ZNA1 936 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 MAPK1IP1LQ8NDC0 245 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 OR52N5Q8NH56 324 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 PMM1Q92871 262 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 VPS33AQ96AX1 596 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 AMBRA1Q9C0C7 1298 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 GRIP2Q9C0E4 1043 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 ADAM19Q9H013 955 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 SDR39U1Q9NRG7 319 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms