RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 ZNF83P51522 516 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 MVDP53602 400 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 CDH11P55287 796 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 ABCE1P61221 599 aaKnown RBP5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 KCNJ10P78508 379 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 DMTNQ08495 405 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 CHI3L2Q15782 390 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 GABRA6Q16445 453 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 SYPL1Q16563 259 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 TNFAIP8L3Q5GJ75 292 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 SPANXN4Q5MJ08 99 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 FBXW9Q5XUX1 488 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 BHLHB9Q6PI77 547 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 C16orf62Q7Z3J2 963 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 P2RY8Q86VZ1 359 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 HIPK1Q86Z02 1210 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 NUDCD3Q8IVD9 361 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 HOMEZQ8IX15 550 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 ZNF100Q8IYN0 542 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 ANKFN1Q8N957 763 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 ZIC4Q8N9L1 334 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 OR10H5Q8NGA6 315 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 OR52E4Q8NGH9 312 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 SPATA3Q8NHX4 192 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 XAGE5Q8WWM1 108 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 GTPBP3Q969Y2 492 aaKnown RBP5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 TESCQ96BS2 214 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 ZBTB9Q96C00 473 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 NEURL3Q96EH8 262 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 TRMT61AQ96FX7 289 aaKnown RBP5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 CCDC115Q96NT0 180 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 MUS81Q96NY9 551 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 ZIM3Q96PE6 472 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 USB1Q9BQ65 265 aaKnown RBP5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 INPP5KQ9BT40 448 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 AMBRA1Q9C0C7 1298 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 SLC38A1Q9H2H9 487 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 EXOSC3Q9NQT5 275 aaKnown RBP5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 SLC6A13Q9NSD5 602 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 PNPOQ9NVS9 261 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 MALT1Q9UDY8 824 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 CHRNA9Q9UGM1 479 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 WDR45Q9Y484 360 aa5.65□□□□□ -1.5
HMGN1P16-201ENST00000508308 TMEM72A0PK05 275 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 AGAP5A6NIR3 686 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 BIRC5O15392 142 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 SSX4O60224 188 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 PMS2P2O95744 297 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 SERPINE1P05121 402 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 CHRM4P08173 479 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 TFPIP10646 304 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 CCNA2P20248 432 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 RPS4Y1P22090 263 aaKnown RBP5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 CD40P25942 277 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 TTKP33981 857 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 IDH2P48735 452 aaKnown RBP5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 CLK1P49759 484 aaKnown RBP5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 RPL14P50914 215 aaKnown RBP5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 MMP16P51512 607 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 NME5P56597 212 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 UFM1P61960 85 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 CSNK2A1P68400 391 aaPredicted RBP5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 MAD2L1Q13257 205 aaPredicted RBP5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 SLC17A1Q14916 467 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 MST1LQ2TV78 715 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 FAM174BQ3ZCQ3 159 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 COX20Q5RI15 118 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 TSPO2Q5TGU0 170 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 GRINAQ7Z429 371 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 RNF130Q86XS8 419 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 OR52N5Q8NH56 324 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 SLC25A43Q8WUT9 341 aaPredicted RBP5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 OIT3Q8WWZ8 545 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 TMEM234Q8WY98 164 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 APH1AQ96BI3 265 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 MUCL1Q96DR8 90 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 TRNT1Q96Q11 434 aaKnown RBP5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 DHRS9Q9BPW9 319 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 C1QTNF6Q9BXI9 259 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 CACNG6Q9BXT2 260 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 RSPO3Q9BXY4 272 aaPredicted RBP5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 NUF2Q9BZD4 464 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 DPY30Q9C005 99 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 ADAM19Q9H013 955 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 MEAF6Q9HAF1 191 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 POLE3Q9NRF9 147 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 SERINC1Q9NRX5 453 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 SLC7A10Q9NS82 523 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 EXD2Q9NVH0 621 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 RLIMQ9NVW2 624 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 OSGIN1Q9UJX0 560 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 TRAPPC4Q9Y296 219 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 SLC35A3Q9Y2D2 325 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 NOSIPQ9Y314 301 aaKnown RBP5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 HDGFL3Q9Y3E1 203 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 RAP2CQ9Y3L5 183 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 CHST2Q9Y4C5 530 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 FLVCR1Q9Y5Y0 555 aa5.64□□□□□ -1.51
HMGN1P16-201ENST00000508308 TMED7-TICAM2A0A0A6YYA0 188 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms