RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 SIRT5Q9NXA8 310 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 USP22Q9UPT9 525 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 FIS1Q9Y3D6 152 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 GRIP1Q9Y3R0 1128 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 ZNF716A6NP11 495 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 H3BNH8 94 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 PDLIM1O00151 329 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 SULT2B1O00204 365 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 SLC28A1O00337 649 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 ITM2AO43736 263 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 LYPLA1O75608 230 aaPredicted RBP12.07□□□□□ -0.48
DDR1-260ENST00000507533 HSPA4LO95757 839 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 WNT11O96014 354 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 ERCC1P07992 297 aaPredicted RBP12.07□□□□□ -0.48
DDR1-260ENST00000507533 ALOX5P09917 674 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 DDX5P17844 614 aaKnown RBP12.07□□□□□ -0.48
DDR1-260ENST00000507533 EPHA1P21709 976 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 PRPS1P60891 318 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 CSNK2A1P68400 391 aaPredicted RBP12.07□□□□□ -0.48
DDR1-260ENST00000507533 STX3Q13277 289 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 RIN1Q13671 783 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 QPRTQ15274 297 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 EFNB3Q15768 340 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 IMPG1Q17R60 797 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 NDUFAF6Q330K2 333 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 UGT3A2Q3SY77 523 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 KLHL26Q53HC5 615 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 C3orf33Q6P1S2 294 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 VHLLQ6RSH7 139 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 TMPPEQ6ZT21 453 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 C1orf162Q8NEQ5 155 aaPredicted RBP12.07□□□□□ -0.48
DDR1-260ENST00000507533 RFWD2Q8NHY2 731 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 WDR60Q8WVS4 1066 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 C16orf58Q96GQ5 468 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 KCNS3Q9BQ31 491 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 QRSL1Q9H0R6 528 aaKnown RBP12.07□□□□□ -0.48
DDR1-260ENST00000507533 GIN1Q9NXP7 522 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 UPB1Q9UBR1 384 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 ZDHHC2Q9UIJ5 367 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 DCTN4Q9UJW0 460 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.07□□□□□ -0.48
DDR1-260ENST00000507533 DNAJC15Q9Y5T4 150 aa12.07□□□□□ -0.48
DDR1-260ENST00000507533 IGHV1-18A0A0C4DH31 117 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 TMEM233B4DJY2 109 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 NPIPB8E9PQR5 432 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 GPR171O14626 319 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 KLF11O14901 512 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 RSL1D1O76021 490 aaKnown RBP12.06□□□□□ -0.48
DDR1-260ENST00000507533 PDE5AO76074 875 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 SLC1A6P48664 564 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 POU6F2P78424 691 aaPredicted RBP12.06□□□□□ -0.48
DDR1-260ENST00000507533 TGFBR3Q03167 851 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 BST1Q10588 318 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 TIGD2Q4W5G0 525 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 C1QTNF12Q5T7M4 302 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 KLHL24Q6TFL4 600 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 ZCCHC24Q8N2G6 241 aaKnown RBP12.06□□□□□ -0.48
DDR1-260ENST00000507533 ZNF527Q8NB42 609 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 OR5W2Q8NH69 310 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 AGR3Q8TD06 166 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 UBASH3BQ8TF42 649 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 TWIST2Q8WVJ9 160 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 MRPL24Q96A35 216 aaKnown RBP12.06□□□□□ -0.48
DDR1-260ENST00000507533 MS4A4EQ96PG1 132 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 BTBD2Q9BX70 525 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 HOXD1Q9GZZ0 328 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 TUBB1Q9H4B7 451 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 LPAR2Q9HBW0 351 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 SERINC1Q9NRX5 453 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 FBXO9Q9UK97 447 aaPredicted RBP12.06□□□□□ -0.48
DDR1-260ENST00000507533 WBP11Q9Y2W2 641 aaKnown RBP12.06□□□□□ -0.48
DDR1-260ENST00000507533 ZNF281Q9Y2X9 895 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 RAP2CQ9Y3L5 183 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 CCL27Q9Y4X3 112 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 POLR3HQ9Y535 204 aaPredicted RBP12.06□□□□□ -0.48
DDR1-260ENST00000507533 VWFP04275 2813 aa12.06□□□□□ -0.48
DDR1-260ENST00000507533 LYNX1G3V0Z9 82 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 ETV2O00321 342 aaPredicted RBP12.05□□□□□ -0.48
DDR1-260ENST00000507533 PDPK1O15530 556 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 LYNX1P0DP58 116 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 ATP6V1C1P21283 382 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 PRPH2P23942 346 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 SLC1A3P43003 542 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 CCR4P51679 360 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 FOXL1Q12952 345 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 CBFBQ13951 182 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.05□□□□□ -0.48
DDR1-260ENST00000507533 ATG16L1Q676U5 607 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 FAHD2BQ6P2I3 314 aaPredicted RBP12.05□□□□□ -0.48
DDR1-260ENST00000507533 ZCCHC12Q6PEW1 402 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 CASP12Q6UXS9 341 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 KIRREL3Q8IZU9 778 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 TMCO5AQ8N6Q1 288 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 JADE3Q92613 823 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 CIDECQ96AQ7 238 aaPredicted RBP12.05□□□□□ -0.48
DDR1-260ENST00000507533 ZHX1-C8orf76Q96EF9 292 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 CHMP6Q96FZ7 201 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 FAHD2AQ96GK7 314 aa12.05□□□□□ -0.48
DDR1-260ENST00000507533 METTL2AQ96IZ6 378 aaKnown RBP12.05□□□□□ -0.48
DDR1-260ENST00000507533 LRRC37BQ96QE4 947 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms