RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 A0A0G2JNJ9 132 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 HSPB2A8KAH6 182 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 SLC28A1O00337 649 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 SYT5O00445 386 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ARPC2O15144 300 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ICMTO60725 284 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ICOSLGO75144 302 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 CRCPO75575 148 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 TRAPPC6AO75865 159 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 TSPAN9O75954 239 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ACTL6AO96019 429 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ALPLP05186 524 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 FGF4P08620 206 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 CT45A8P0DMV1 189 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 CT45A9P0DMV2 189 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 PTPN6P29350 595 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 TIMP3P35625 211 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 MASP1P48740 699 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 HTR6P50406 440 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 PNLIPRP2P54317 469 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 FOXA1P55317 472 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 CTAG1AP78358 180 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 CRYZQ08257 329 aaKnown RBP7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ZNF763Q0D2J5 394 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 C2orf80Q0P641 193 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 PLCXD2Q0VAA5 305 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 EFR3AQ14156 821 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 KIAA0040Q15053 153 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 HSPB2Q16082 182 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 IMPG1Q17R60 797 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 SLC25A35Q3KQZ1 300 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 CT45A2Q5DJT8 189 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 SPANXN2Q5MJ10 180 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 FAM71E1Q6IPT2 247 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 NOXRED1Q6NXP6 359 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 FAM122CQ6P4D5 195 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 MEX3BQ6ZN04 569 aaKnown RBP7.29□□□□□ -1.24
SCN1A-207ENST00000507401 CREB3L2Q70SY1 520 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 R3HCC1LQ7Z5L2 792 aaKnown RBP7.29□□□□□ -1.24
SCN1A-207ENST00000507401 HIPK1Q86Z02 1210 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 CCDC71Q8IV32 467 aaPredicted RBP7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ELMOD2Q8IZ81 293 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 MIER2Q8N344 545 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 OR1J4Q8NGS1 313 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 OR6F1Q8NGZ6 308 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 MCFD2Q8NI22 146 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 EXOSC8Q96B26 276 aaKnown RBP7.29□□□□□ -1.24
SCN1A-207ENST00000507401 OMA1Q96E52 524 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 YIPF6Q96EC8 236 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 MARK4Q96L34 752 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 LURAP1Q96LR2 239 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 VSTM2LQ96N03 204 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 CCDC115Q96NT0 180 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 COL21A1Q96P44 957 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ZNF300Q96RE9 604 aaPredicted RBP7.29□□□□□ -1.24
SCN1A-207ENST00000507401 KCNA7Q96RP8 456 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 COQ7Q99807 217 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 KCTD14Q9BQ13 255 aaPredicted RBP7.29□□□□□ -1.24
SCN1A-207ENST00000507401 UCK2Q9BZX2 261 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 PRDM14Q9GZV8 571 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 RACGAP1Q9H0H5 632 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 PCDHAC1Q9H158 963 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 METTL7AQ9H8H3 244 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 MCCC2Q9HCC0 563 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 MYNNQ9NPC7 610 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 RPRD1BQ9NQG5 326 aaKnown RBP7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ALKBH4Q9NXW9 302 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 PTTG3PQ9NZH4 202 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 DNAJB9Q9UBS3 223 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ZNF629Q9UEG4 869 aaPredicted RBP7.29□□□□□ -1.24
SCN1A-207ENST00000507401 Q9UFV3 132 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ZDHHC2Q9UIJ5 367 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 KLHL21Q9UJP4 597 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 PACSIN3Q9UKS6 424 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 AURKCQ9UQB9 309 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 CCL27Q9Y4X3 112 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 EXPH5Q8NEV8 1989 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 ARHGAP21Q5T5U3 1957 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 NKX2-6A6NCS4 301 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 CD8B2A6NJW9 211 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 SNTNA6NMZ2 147 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 RGS14O43566 566 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 TSPAN2O60636 221 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 TBX19O60806 448 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 SEC22BO75396 215 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 REM1O75628 298 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 PRKD3O94806 890 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 CPN1P15169 458 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 BMP7P18075 431 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 ATP6V1B2P21281 511 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 PCMT1P22061 227 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 CEACAM8P31997 349 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-207ENST00000507401 SOX6P35712 828 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 KRT20P35900 424 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 PTGDSP41222 190 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 HTR3AP46098 478 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 CHRNB3Q05901 458 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 KEAP1Q14145 624 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 LTB4RQ15722 352 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 NPTX1Q15818 432 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms