RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 TIMD4Q96H15 378 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 CDK15Q96Q40 435 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 IPPKQ9H8X2 491 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 CRLF2Q9HC73 371 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 SLC35C2Q9NQQ7 365 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 UBQLN4Q9NRR5 601 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 SERINC1Q9NRX5 453 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 DDX18Q9NVP1 670 aaKnown RBP6.13□□□□□ -1.43
VCAN-207ENST00000507162 NUDT4Q9NZJ9 180 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 DUSP13Q9UII6 198 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 C19orf53Q9UNZ5 99 aaPredicted RBP6.13□□□□□ -1.43
VCAN-207ENST00000507162 ACOT9Q9Y305 439 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 NOX1Q9Y5S8 564 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 A0A1W2PPW3 197 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 H0YL77 283 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 TRAPPC2LH3BP13 241 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 XPNPEP2O43895 674 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 IGLV1-44P01699 117 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 NGFRP08138 427 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 PAX7P23759 505 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 EVX1P49640 407 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 P2RX1P51575 399 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 CCR4P51679 360 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 PRKAG1P54619 331 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 OR2B6P58173 313 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 GALNT1Q10472 559 aaPredicted RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 DBPQ10586 325 aaPredicted RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 GTF2H2Q13888 395 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 MSMPQ1L6U9 139 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 NDUFAF6Q330K2 333 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 MSS51Q4VC12 460 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 TIGD2Q4W5G0 525 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 GKAP1Q5VSY0 366 aaPredicted RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 TET2Q6N021 2002 aaPredicted RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 GTF2H2CQ6P1K8 395 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 LRIG3Q6UXM1 1119 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 ZNF620Q6ZNG0 422 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 LIAT1Q6ZQX7 453 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 MEPCEQ7L2J0 689 aaKnown RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 GOLGA7Q7Z5G4 137 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 MYPOPQ86VE0 399 aaPredicted RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 PARP8Q8N3A8 854 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 C1orf52Q8N6N3 182 aaKnown RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 OR1K1Q8NGR3 316 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 PIGXQ8TBF5 258 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 STAG3L4Q8TBR4 150 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 BCL2L2Q92843 193 aaPredicted RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 LRRC39Q96DD0 335 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 LMF2Q9BU23 707 aaKnown RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 POPDC3Q9HBV1 291 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 MYEF2Q9P2K5 600 aaKnown RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 CRNNQ9UBG3 495 aaPredicted RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 RNF14Q9UBS8 474 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 ZKSCAN5Q9Y2L8 839 aa6.12□□□□□ -1.43
VCAN-207ENST00000507162 MTO1Q9Y2Z2 717 aaKnown RBP6.12□□□□□ -1.43
VCAN-207ENST00000507162 PPIAL4EA0A075B759 164 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 A0A087WV62 115 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 A0A096LPK6 155 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 PPIAL4CA0A0B4J2A2 164 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 IGHV1-69-2A0A0G2JMI3 117 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 GNG14A0A1W2PPG7 69 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 MYO1GB0I1T2 1018 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 TRIM49D1C9J1S8 452 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 CLDN25C9JDP6 229 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 PPIAL4DF5H284 164 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 UGDHO60701 494 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 ULK1O75385 1050 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 FGGP02679 453 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 PPIAL4FP0DN26 164 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 CBR1P16152 277 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 NR4A1P22736 598 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 TRA2BP62995 288 aaKnown RBP6.11□□□□□ -1.43
VCAN-207ENST00000507162 TEKQ02763 1124 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 MERTKQ12866 999 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 QPRTQ15274 297 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 PFKFB4Q16877 469 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 NKPD1Q17RQ9 610 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 C3orf36Q3SXR2 165 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 TECRLQ5HYJ1 363 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 CCNJQ5T5M9 372 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 FRG2Q64ET8 278 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 C3orf33Q6P1S2 294 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 TMEM154Q6P9G4 183 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 BRD3OSQ6XYD6 125 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 Q6YL49 198 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 C9orf139Q6ZV77 190 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 AAED1Q7RTV5 226 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 ABHD12BQ7Z5M8 362 aaPredicted RBP6.11□□□□□ -1.43
VCAN-207ENST00000507162 C11orf44Q8N8P7 122 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 NAT8LQ8N9F0 302 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 L3MBTL4Q8NA19 623 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 OR10S1Q8NGN2 331 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 OR6Y1Q8NGX8 325 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 UBTD2Q8WUN7 234 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 FRG2BQ96QU4 278 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 RBBP8Q99708 897 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 NAT9Q9BTE0 207 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 VPS11Q9H270 941 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 NOL11Q9H8H0 719 aaKnown RBP6.11□□□□□ -1.43
VCAN-207ENST00000507162 NOX3Q9HBY0 568 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms