RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 NPIPB13A6NJU9 1138 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 ZNF724A8MTY0 619 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 NPIPB4C9JG80 1138 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 ARPC2O15144 300 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 MGRN1O60291 552 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 CYP7B1O75881 506 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 AHSA1O95433 338 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 PRB1P04280 392 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 TACR3P29371 465 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 IFNGR2P38484 337 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 RFC3P40938 356 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 MAGEA2P43356 314 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 CRYBA2P53672 197 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 H3F3AP84243 136 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 PLAURQ03405 335 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 SF3A3Q12874 501 aaKnown RBP eCLIP7.61□□□□□ -1.19
PDGFC-205ENST00000506880 POU4F3Q15319 338 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 OR1Q1Q15612 314 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 CTU2Q2VPK5 515 aaKnown RBP7.61□□□□□ -1.19
PDGFC-205ENST00000506880 FAM98BQ52LJ0 330 aaKnown RBP7.61□□□□□ -1.19
PDGFC-205ENST00000506880 LRRC23Q53EV4 343 aaPredicted RBP7.61□□□□□ -1.19
PDGFC-205ENST00000506880 PRR30Q53SZ7 412 aaPredicted RBP7.61□□□□□ -1.19
PDGFC-205ENST00000506880 EMC4Q5J8M3 183 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 HBMQ6B0K9 141 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 FGD2Q7Z6J4 655 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 GALNT10Q86SR1 603 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 GGNQ86UU5 652 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 CARM1Q86X55 608 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 ADGRG3Q86Y34 549 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 GATSQ8NAP1 163 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 ANKK1Q8NFD2 765 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 GPR32P1Q8NGA4 272 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 POC1BQ8TC44 478 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 ADAMTS16Q8TE57 1224 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 DHRS1Q96LJ7 313 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 RAB3IPQ96QF0 476 aaPredicted RBP7.61□□□□□ -1.19
PDGFC-205ENST00000506880 MCHR1Q99705 422 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 TTYH2Q9BSA4 534 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 TAPBPLQ9BX59 468 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 QRSL1Q9H0R6 528 aaKnown RBP7.61□□□□□ -1.19
PDGFC-205ENST00000506880 BCO1Q9HAY6 547 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 MOV10Q9HCE1 1003 aaKnown RBP7.61□□□□□ -1.19
PDGFC-205ENST00000506880 RLIMQ9NVW2 624 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 LUZP4Q9P127 313 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 ERRFI1Q9UJM3 462 aaPredicted RBP7.61□□□□□ -1.19
PDGFC-205ENST00000506880 CAMK2AQ9UQM7 478 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 RASD1Q9Y272 281 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 TMEM5Q9Y2B1 443 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 TMED7Q9Y3B3 224 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 ENPP4Q9Y6X5 453 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 SPENQ96T58 3664 aaKnown RBP7.6□□□□□ -1.19
PDGFC-205ENST00000506880 USP9YO00507 2555 aaPredicted RBP7.6□□□□□ -1.19
PDGFC-205ENST00000506880 TRGV8A0A0C4DH27 118 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 C2orf72A6NCS6 295 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 ARRDC5A6NEK1 342 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 SLC22A20A6NK97 555 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 CENPBD1B2RD01 187 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 B4DXG7 233 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 H3BML4 177 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 SULT2B1O00204 365 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 CCL21O00585 134 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 DVL2O14641 736 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 GSC2O15499 205 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 AKAP8O43823 692 aaKnown RBP7.6□□□□□ -1.19
PDGFC-205ENST00000506880 ENTPD5O75356 428 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 SERPINA1P01009 418 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 C1QCP02747 245 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 CELA3AP09093 270 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 RAP2AP10114 183 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 FCGR1AP12314 374 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 NR2C1P13056 603 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 ENPP1P22413 925 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 CTSSP25774 331 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 AQP1P29972 269 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 IDUAP35475 653 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 CPA2P48052 419 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 SLC9A3P48764 834 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 HMGA2P52926 109 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 NUP107P57740 925 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 TAS2R41P59536 307 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 CHRNB3Q05901 458 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 CEACAM7Q14002 265 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 TRAM2Q15035 370 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 STK11Q15831 433 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 C3AR1Q16581 482 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 SGCBQ16585 318 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 ENTPD8Q5MY95 495 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 C1QL3Q5VWW1 255 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 TTC33Q6PID6 262 aaPredicted RBP7.6□□□□□ -1.19
PDGFC-205ENST00000506880 ASRGL1Q7L266 308 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 MRGPRGQ86SM5 289 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 OR6T1Q8NGN1 323 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 OR10D3Q8NH80 312 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 RNF128Q8TEB7 428 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 DNAJC9Q8WXX5 260 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 DUS3LQ96G46 650 aaKnown RBP7.6□□□□□ -1.19
PDGFC-205ENST00000506880 THTPAQ9BU02 230 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 FKRPQ9H9S5 495 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 CHST11Q9NPF2 352 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 CTPS2Q9NRF8 586 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms