RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 GMEB1Q9Y692 573 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 CADP27708 2225 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 A0A096LPI6 279 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 TMED7-TICAM2A0A0A6YYA0 188 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 TMEM72A0PK05 275 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 CFAP73A6NFT4 308 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 POLR3GO15318 223 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF208O43345 1280 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 RAMP1O60894 148 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 ANP32DO95626 131 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 PLAUP00749 431 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 ADAP00813 363 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 BCHEP06276 602 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 THBS1P07996 1170 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 TFPIP10646 304 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 IMPDH2P12268 514 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 FOSL1P15407 271 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 TACR3P29371 465 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 NTF4P34130 210 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 CRATP43155 626 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 MMP16P51512 607 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 POLR2HP52434 150 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 NKX6-1P78426 367 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 FADDQ13158 208 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 RGNQ15493 299 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 TSC22D1Q15714 1073 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 TAB1Q15750 504 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 LIN52Q52LA3 116 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 C6orf10Q5SRN2 563 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 PRAMEF8Q5VWM4 474 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 PRAMEF7Q5VXH5 474 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 SHEQ5VZ18 495 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 SLC2A7Q6PXP3 512 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF704Q6ZNC4 412 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 GALNT5Q7Z7M9 940 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 LSRQ86X29 649 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 VRK2Q86Y07 508 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 WFDC8Q8IUA0 241 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 MSRB3Q8IXL7 192 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 PIGXQ8TBF5 258 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 KISS1RQ969F8 398 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 PIGTQ969N2 578 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF775Q96BV0 537 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 PLPPR2Q96GM1 343 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 TMEM19Q96HH6 336 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 RSPO3Q9BXY4 272 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 POTEKPQ9BYX7 375 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 UBTD1Q9HAC8 227 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 BCL2L10Q9HD36 194 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 A4GALTQ9NPC4 353 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 RLIMQ9NVW2 624 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 TMEM45AQ9NWC5 275 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 SLC25A37Q9NYZ2 338 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 EMC3Q9P0I2 261 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 TMEM181Q9P2C4 612 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 PRSS50Q9UI38 385 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 TMED7Q9Y3B3 224 aa8.03□□□□□ -1.12
PDLIM5-209ENST00000506632 NAV3Q8IVL0 2385 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 TRBV5-3A0A0A0MS03 114 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 A0A0G2JPF8 293 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 ZC3H12DA2A288 527 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 HNRNPCL2B2RXH8 293 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 HNRNPCL3B7ZW38 293 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 CLIC1O00299 241 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 GPR171O14626 319 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 HS3ST1O14792 307 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 HNRNPCL1O60812 293 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 GKN3PP0CG01 181 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 HNRNPCL4P0DMR1 293 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 PAX1P15863 534 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 H2AFXP16104 143 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 IGHV1-2P23083 117 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 IL32P24001 234 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 ATP4BP51164 291 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 AQP5P55064 265 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 STX1BP61266 288 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 IRX1P78414 480 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 ZSWIM7Q19AV6 140 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 RPS26P11Q5JNZ5 115 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 NCMAPQ5T1S8 102 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 ADAM5Q6NVV9 412 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 BHLHA15Q7RTS1 189 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 CCDC103Q8IW40 242 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 CLIP4Q8N3C7 705 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 ZNF611Q8N823 705 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 OR52P1PQ8NH57 321 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 HSD17B8Q92506 261 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 SLC35B4Q969S0 331 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 DDIT4LQ96D03 193 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 SPDL1Q96EA4 605 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 ZHX1-C8orf76Q96EF9 292 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 DNAJA3Q96EY1 480 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 CCL19Q99731 98 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 SPATA9Q9BWV2 254 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 RAD21L1Q9H4I0 556 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 VIPAS39Q9H9C1 493 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 ZNF443Q9Y2A4 671 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 VPS13CQ709C8 3753 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 USF3Q68DE3 2245 aa8.02□□□□□ -1.13
PDLIM5-209ENST00000506632 LIPT2A6NK58 231 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms