RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 RNF113BQ8IZP6 322 aaKnown RBP12.6□□□□□ -0.39
SERF1B-204ENST00000506542 ZNF786Q8N393 782 aa12.6□□□□□ -0.39
SERF1B-204ENST00000506542 SLC15A4Q8N697 577 aa12.6□□□□□ -0.39
SERF1B-204ENST00000506542 GNPDA2Q8TDQ7 276 aa12.6□□□□□ -0.39
SERF1B-204ENST00000506542 FBLIM1Q8WUP2 373 aa12.6□□□□□ -0.39
SERF1B-204ENST00000506542 HGDQ93099 445 aa12.6□□□□□ -0.39
SERF1B-204ENST00000506542 MPP4Q96JB8 637 aa12.6□□□□□ -0.39
SERF1B-204ENST00000506542 SLX1AQ9BQ83 275 aa12.6□□□□□ -0.39
SERF1B-204ENST00000506542 HPF1Q9NWY4 346 aa12.6□□□□□ -0.39
SERF1B-204ENST00000506542 EIF4E2O60573 245 aaKnown RBP12.59□□□□□ -0.39
SERF1B-204ENST00000506542 TP53P04637 393 aaPredicted RBP12.59□□□□□ -0.39
SERF1B-204ENST00000506542 LINGO3P0C6S8 592 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 CHMP24386 653 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 GGT2P36268 569 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 GSSP48637 474 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 MEOX1P50221 254 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 NUP107P57740 925 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 COPZ1P61923 177 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 ALDH6A1Q02252 535 aaKnown RBP12.59□□□□□ -0.39
SERF1B-204ENST00000506542 ZNF117Q03924 483 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 TSPAN31Q12999 210 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 PTGES3Q15185 160 aaKnown RBP12.59□□□□□ -0.39
SERF1B-204ENST00000506542 PRAMEF20Q5VT98 475 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 BICRALQ6AI39 1079 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 ULK3Q6PHR2 472 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 Q6ZPB1 254 aaPredicted RBP12.59□□□□□ -0.39
SERF1B-204ENST00000506542 NUP54Q7Z3B4 507 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 MARCH3Q86UD3 253 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 CCDC71Q8IV32 467 aaPredicted RBP12.59□□□□□ -0.39
SERF1B-204ENST00000506542 CADM2Q8N3J6 435 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 TMCO5AQ8N6Q1 288 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 PSD4Q8NDX1 1056 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 OR10G3Q8NGC4 313 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 RNF138Q8WVD3 245 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 TMEM239Q8WW34 195 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 TMCO6Q96DC7 493 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 HS6ST2Q96MM7 605 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 NODALQ96S42 347 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 GPA33Q99795 319 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 ZNF426Q9BUY5 554 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 KRCC1Q9NPI7 259 aaPredicted RBP12.59□□□□□ -0.39
SERF1B-204ENST00000506542 RPS6KB2Q9UBS0 482 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 GTF3C1Q12789 2109 aa12.59□□□□□ -0.39
SERF1B-204ENST00000506542 DNAJC13O75165 2243 aa12.58□□□□□ -0.39
SERF1B-204ENST00000506542 ZAR1LA6NP61 321 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 NPIPA5E9PKD4 350 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 ADAM10O14672 748 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 GPR37O15354 613 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 KLF4O43474 513 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 PIP5K1CO60331 668 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 ANGPTL1O95841 491 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 FBXO45P0C2W1 286 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 FPR3P25089 353 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 RBM34P42696 430 aaKnown RBP12.58□□□□□ -0.4
SERF1B-204ENST00000506542 SLC6A8P48029 635 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 DNASE1L1P49184 302 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 CCR4P51679 360 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 IL5RAQ01344 420 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 CTU2Q2VPK5 515 aaKnown RBP12.58□□□□□ -0.4
SERF1B-204ENST00000506542 KCTD21Q4G0X4 260 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 CRYBG3Q68DQ2 2970 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 WBP2NLQ6ICG8 309 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 LINC00114Q6XXX2 140 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 TMEM178AQ8NBL3 297 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 RNF217Q8TC41 542 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 DNAJA4Q8WW22 397 aaPredicted RBP12.58□□□□□ -0.4
SERF1B-204ENST00000506542 FAM46AQ96IP4 442 aaKnown RBP12.58□□□□□ -0.4
SERF1B-204ENST00000506542 YTHDF1Q9BYJ9 559 aaKnown RBP12.58□□□□□ -0.4
SERF1B-204ENST00000506542 CNIH4Q9P003 139 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 ICAM5Q9UMF0 924 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 NPIPA1Q9UND3 350 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 MYO7BQ6PIF6 2116 aa12.58□□□□□ -0.4
SERF1B-204ENST00000506542 TRIM64A6NGJ6 449 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 FAM166BA8MTA8 275 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 HCRTR2O43614 444 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 SCO2O43819 266 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 SOX14O95416 240 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 SMIM18P0DKX4 95 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 ELK4P28324 431 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 NTRK2Q16620 822 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 ZNF791Q3KP31 576 aaPredicted RBP12.57□□□□□ -0.4
SERF1B-204ENST00000506542 MEX3DQ86XN8 651 aaKnown RBP12.57□□□□□ -0.4
SERF1B-204ENST00000506542 MISPQ8IVT2 679 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 HDAC2Q92769 488 aaKnown RBP12.57□□□□□ -0.4
SERF1B-204ENST00000506542 C3orf49Q96BT1 292 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 SPACA9Q96E40 222 aaPredicted RBP12.57□□□□□ -0.4
SERF1B-204ENST00000506542 SELENONQ9NZV5 590 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 SH3BGRL2Q9UJC5 107 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 OSGIN2Q9Y236 505 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 PCNX1Q96RV3 2341 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 H3BN98 237 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 PTNP21246 168 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 POU1F1P28069 291 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 GPR4P46093 362 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 IDH2P48735 452 aaKnown RBP12.57□□□□□ -0.4
SERF1B-204ENST00000506542 CTBP2P56545 445 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 PRKCDQ05655 676 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 CDK5R2Q13319 367 aa12.57□□□□□ -0.4
SERF1B-204ENST00000506542 MAD2L1BPQ15013 274 aaPredicted RBP12.57□□□□□ -0.4
SERF1B-204ENST00000506542 RBM48Q5RL73 367 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms