RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 TBC1D3EA0A087X179 549 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 TBC1D3KA0A087X1G2 549 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 A0A0J9YVX5 310 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 TEX13CA0A0J9YWL9 993 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 TBC1D3FA6NER0 549 aaPredicted RBP5.37□□□□□ -1.55
SCLT1-207ENST00000506233 KDM4EB2RXH2 506 aaPredicted RBP5.37□□□□□ -1.55
SCLT1-207ENST00000506233 TBC1D3LB9A6J9 549 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 GPX5O75715 221 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 TBC1D3HP0C7X1 549 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 RORAP35398 523 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 ETV5P41161 510 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 PTGDSP41222 190 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 CCT3P49368 545 aaKnown RBP5.37□□□□□ -1.55
SCLT1-207ENST00000506233 ETV1P50549 477 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 UGT2B15P54855 530 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 TMBIM6P55061 237 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 RPS4XP62701 263 aaKnown RBP5.37□□□□□ -1.55
SCLT1-207ENST00000506233 ABATP80404 500 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 BNIP3Q12983 259 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 KIR2DS3Q14952 304 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 RBBP5Q15291 538 aaKnown RBP5.37□□□□□ -1.55
SCLT1-207ENST00000506233 LRRC23Q53EV4 343 aaPredicted RBP5.37□□□□□ -1.55
SCLT1-207ENST00000506233 IGSF11Q5DX21 431 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 GCNT6Q5T4J0 391 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 TBC1D3GQ6DHY5 549 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 TBC1D3CQ6IPX1 549 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 SLC25A24Q6NUK1 477 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 ERICH5Q6P6B1 374 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 BIVMQ86UB2 503 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 TBC1D3Q8IZP1 549 aaPredicted RBP5.37□□□□□ -1.55
SCLT1-207ENST00000506233 ZNF721Q8TF20 911 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 FAM162AQ96A26 154 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 EXOSC8Q96B26 276 aaKnown RBP5.37□□□□□ -1.55
SCLT1-207ENST00000506233 MMABQ96EY8 250 aaPredicted RBP5.37□□□□□ -1.55
SCLT1-207ENST00000506233 EDEM2Q9BV94 578 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 AKIRIN1Q9H9L7 192 aaPredicted RBP5.37□□□□□ -1.55
SCLT1-207ENST00000506233 PEMTQ9UBM1 199 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 FBXW2Q9UKT8 454 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 LRBAP50851 2863 aa5.37□□□□□ -1.55
SCLT1-207ENST00000506233 TNRC6AQ8NDV7 1962 aaKnown RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 TMEM265A0A087WTH1 108 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 BCKDKO14874 412 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ERI3O43414 337 aaKnown RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ENTPD6O75354 484 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 CRCPO75575 148 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 NKX2-2O95096 273 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PROS1P07225 676 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 POLR2CP19387 275 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 IL10P22301 178 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SERPINB1P30740 379 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 GATA4P43694 442 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 DLX5P56178 289 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 RPL15P61313 204 aaKnown RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 RPS11P62280 158 aaKnown RBP eCLIP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 HPCAP84074 193 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 TSTA3Q13630 321 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SYT14P1Q58G82 188 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PRAMEF8Q5VWM4 474 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PRAMEF7Q5VXH5 474 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 NKAIN2Q5VXU1 208 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 HIST2H2BCQ6DN03 193 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 HIST2H2BDQ6DRA6 164 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 GDF7Q7Z4P5 450 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 NUDT13Q86X67 352 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 HIPK1Q86Z02 1210 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ZDHHC13Q8IUH4 622 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ARL14Q8N4G2 192 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 IQCF1Q8N6M8 205 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PFN4Q8NHR9 129 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SKA2Q8WVK7 121 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PIK3R3Q92569 461 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PPWD1Q96BP3 646 aaKnown RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 RMND5AQ9H871 391 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ZBTB20Q9HC78 741 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 IL20Q9NYY1 176 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 FBXL4Q9UKA2 621 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 TRIOBPQ9H2D6 2365 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 MN1Q10571 1320 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 A0A0A6YYC8 382 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PRAMEF26H0Y7S4 382 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 I3L1I5 382 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SURF4O15260 269 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 CSO75390 466 aaKnown RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 TPPPO94811 219 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PNPP00491 289 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SLC35G4P0C7Q5 338 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 LIMS3P0CW19 117 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 LIMS4P0CW20 117 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 CNR2P34972 360 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ETV6P41212 452 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 CRATP43155 626 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SIM1P81133 766 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ZNF273Q14593 569 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 KRT80Q6KB66 452 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ZNF517Q6ZMY9 492 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 DBX2Q6ZNG2 339 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 Q6ZNX1 250 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 LINC00696Q6ZRV3 163 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SSX6Q7RTT6 188 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PRSS48Q7RTY5 328 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms