RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ZFP1Q6P2D0 407 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 FOXL2NBQ6ZUU3 175 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 LILRA2Q8N149 483 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 LINC00471Q8N535 108 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 OR4K17Q8NGC6 315 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 ACOT11Q8WXI4 607 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 KLHL15Q96M94 604 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 MCHR1Q99705 422 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 VKORC1Q9BQB6 163 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 TUBA1CQ9BQE3 449 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 TACO1Q9BSH4 297 aaKnown RBP7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 NMNAT1Q9HAN9 279 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 USE1Q9NZ43 259 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 HIF3AQ9Y2N7 669 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 RELNP78509 3460 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 TRAV36DV7A0A075B6V5 113 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 J3KTA2 159 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF432O94892 652 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 IFNW1P05000 195 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 IGFBP2P18065 325 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 AQP1P29972 269 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 SYT14P1Q58G82 188 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 SHQ1Q6PI26 577 aaKnown RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 TMEM179BQ7Z7N9 219 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 ANKK1Q8NFD2 765 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 CANT1Q8WVQ1 401 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 LZICQ8WZA0 190 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 SNX18Q96RF0 628 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 GLRX2Q9NS18 164 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 ALKBH4Q9NXW9 302 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 REV1Q9UBZ9 1251 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 ACACBO00763 2458 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 A0A087WUU8 490 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 DHRS12A0PJE2 317 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZC3H12DA2A288 527 aaKnown RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 KDM4EB2RXH2 506 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 MS4A18H0YCH9 400 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 TNFSF13O75888 250 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 GP1BBP13224 206 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 GABRA1P14867 456 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 UQCRBP14927 111 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 TNFRSF1BP20333 461 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 CLDN20P56880 219 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 RIPK1Q13546 671 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 MS4A18Q3C1V0 323 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 COLEC12Q5KU26 742 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 TMPPEQ6ZT21 453 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 CISD2Q8N5K1 135 aaKnown RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 RNF148Q8N7C7 305 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZIC4Q8N9L1 334 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 OR2V1Q8NHB1 315 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 SLC7A13Q8TCU3 470 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 PROX1Q92786 737 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 TAAR8Q969N4 342 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 FAM162AQ96A26 154 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 RAB3IPQ96QF0 476 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 A0A1B0GTH9 108 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF814B7Z6K7 855 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 FKBP6O75344 327 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 MT-ND1P03886 318 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 FAM122BQ7Z309 247 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 HMGN2P46Q86SG4 172 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 NKAIN4Q8IVV8 208 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 TEX19Q8NA77 164 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 GATSQ8NAP1 163 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 DNAJC9Q8WXX5 260 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 SARAFQ96BY9 339 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 TSPAN10Q9H1Z9 355 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 KLHL28Q9NXS3 571 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 TAS2R5Q9NYW4 299 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 DKKL1Q9UK85 242 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 SLC7A7Q9UM01 511 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 SPIN1Q9Y657 262 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 FAM166BA8MTA8 275 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 TFECO14948 347 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 RRP9O43818 475 aaKnown RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 GLI4P10075 376 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 MSX2P35548 267 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 SLC9A3P48764 834 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 TRAM2Q15035 370 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 EIF2S3LQ2VIR3 472 aaKnown RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 C4orf17Q53FE4 359 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 C1orf185Q5T7R7 199 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 EEF1A1P5Q5VTE0 462 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 EPHX4Q8IUS5 362 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 PIAS4Q8N2W9 510 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 CPNE4Q96A23 557 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 PNPLA3Q9NST1 481 aa7.41□□□□□ -1.22
CDC42SE2-208ENST00000505065 HNRNPRO43390 633 aaKnown RBP7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 CNOT4O95628 575 aaKnown RBP7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 FPR3P25089 353 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 IDUAP35475 653 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 RGS8P57771 180 aaPredicted RBP7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 ADORA2A-AS1P86434 159 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 ST3GAL3Q11203 375 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 MYBPHQ13203 477 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 FLOT2Q14254 428 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 C1orf140Q5VVS0 124 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 PAQR6Q6TCH4 344 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 YRDCQ86U90 279 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms