RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 TFPIP10646 304 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 COX5AP20674 150 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 EDNRAP25101 427 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 TACR3P29371 465 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 NR1H2P55055 460 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 ADAM8P78325 824 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 ITGADQ13349 1161 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 SQLEQ14534 574 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 RPS26P11Q5JNZ5 115 aaPredicted RBP12.12□□□□□ -0.47
HOXC6-203ENST00000504315 SEZ6L2Q6UXD5 910 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 VRK2Q86Y07 508 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 KRTAP1-3Q8IUG1 177 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 PIGXQ8TBF5 258 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 SLC35B4Q969S0 331 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 S100PBPQ96BU1 408 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 ZHX1-C8orf76Q96EF9 292 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 USB1Q9BQ65 265 aaKnown RBP12.12□□□□□ -0.47
HOXC6-203ENST00000504315 TMEM204Q9BSN7 226 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 RLIMQ9NVW2 624 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 VAPAQ9P0L0 249 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 SLAMF8Q9P0V8 285 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 TMEM181Q9P2C4 612 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 IFT52Q9Y366 437 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 ZFHX3Q15911 3703 aa12.12□□□□□ -0.47
HOXC6-203ENST00000504315 SETD2Q9BYW2 2564 aaPredicted RBP12.12□□□□□ -0.47
HOXC6-203ENST00000504315 TMEM247A6NEH6 219 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 ADAP00813 363 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 GKN3PP0CG01 181 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 ARAFP10398 606 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 IMPDH2P12268 514 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 ETS2P15036 469 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 HOXC12P31275 282 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 LARS2Q15031 903 aaKnown RBP12.11□□□□□ -0.47
HOXC6-203ENST00000504315 ACKR1Q16570 336 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 PAGE3Q5JUK9 113 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 WBP2NLQ6ICG8 309 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 C20orf204Q6ZNR8 217 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 GALNT5Q7Z7M9 940 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 CLIP4Q8N3C7 705 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 BBS10Q8TAM1 723 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 IGFBPL1Q8WX77 278 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 KISS1RQ969F8 398 aaPredicted RBP12.11□□□□□ -0.47
HOXC6-203ENST00000504315 MAL2Q969L2 176 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 DDIT4LQ96D03 193 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 SPATA9Q9BWV2 254 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 POTEKPQ9BYX7 375 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 ZNF385DQ9H6B1 395 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 EMC3Q9P0I2 261 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 PRSS50Q9UI38 385 aa12.11□□□□□ -0.47
HOXC6-203ENST00000504315 A0A1W2PP18 115 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 ZC3H12DA2A288 527 aaKnown RBP12.1□□□□□ -0.47
HOXC6-203ENST00000504315 NR5A2O00482 541 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 EIF1BO60739 113 aaKnown RBP12.1□□□□□ -0.47
HOXC6-203ENST00000504315 EDF1O60869 148 aaKnown RBP12.1□□□□□ -0.47
HOXC6-203ENST00000504315 RAMP1O60894 148 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 PGM3O95394 542 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 GPX2P18283 190 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 FPR1P21462 350 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 IGHV1-2P23083 117 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 PPIBP23284 216 aaKnown RBP12.1□□□□□ -0.47
HOXC6-203ENST00000504315 IL32P24001 234 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 SLC35A1P78382 337 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 FOXD4Q12950 439 aaPredicted RBP12.1□□□□□ -0.47
HOXC6-203ENST00000504315 TAB1Q15750 504 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 AGKQ53H12 422 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 PAQR6Q6TCH4 344 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 LRRC75A-AS1Q8N1F1 130 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 C10orf111Q8N326 155 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 HSD17B8Q92506 261 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 PIGTQ969N2 578 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 SIKE1Q9BRV8 207 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 RSPO3Q9BXY4 272 aaPredicted RBP12.1□□□□□ -0.47
HOXC6-203ENST00000504315 RABEP2Q9H5N1 569 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 ARMC7Q9H6L4 198 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 DLL4Q9NR61 685 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 ARFGEF3Q5TH69 2177 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 NAV3Q8IVL0 2385 aa12.1□□□□□ -0.47
HOXC6-203ENST00000504315 GPR171O14626 319 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 NPIPB7O75200 414 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 CD99P14209 185 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 CCNA2P20248 432 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 NTF4P34130 210 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 TSC22D1Q15714 1073 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 GCNT6Q5T4J0 391 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 DLEU7Q6UYE1 221 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 ZNF704Q6ZNC4 412 aaPredicted RBP12.09□□□□□ -0.47
HOXC6-203ENST00000504315 BHLHA15Q7RTS1 189 aaPredicted RBP12.09□□□□□ -0.47
HOXC6-203ENST00000504315 SSX8Q7RTT4 187 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 SERPINA11Q86U17 422 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 WFDC8Q8IUA0 241 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 CCDC103Q8IW40 242 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 PLPPR2Q96GM1 343 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 IKZF5Q9H5V7 419 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 TMEM38AQ9H6F2 299 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 UBTD1Q9HAC8 227 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 MALT1Q9UDY8 824 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 ZNF232Q9UNY5 417 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 CORO2BQ9UQ03 480 aa12.09□□□□□ -0.47
HOXC6-203ENST00000504315 NOSIPQ9Y314 301 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms