RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 C1QL3Q5VWW1 255 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 FAM180AQ6UWF9 173 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 PFN4Q8NHR9 129 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 NEIL3Q8TAT5 605 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 GIPC3Q8TF64 312 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 CIB1Q99828 191 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 SPIN1Q9Y657 262 aaPredicted RBP18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 TRGV5A0A0B4J1U4 118 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 LINC01387J3KSC0 135 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 PIP5K1CO60331 668 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 IGHG3P01860 377 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 STARP49675 285 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 SYT14P1Q58G82 188 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 PRICKLE2Q7Z3G6 844 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 HIPK1Q86Z02 1210 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 SVOPLQ8N434 492 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 OR9Q2Q8NGE9 314 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 DDIT4LQ96D03 193 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 KTI12Q96EK9 354 aaPredicted RBP18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 SLC19A3Q9BZV2 496 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 EXO5Q9H790 373 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 C20orf141Q9NUB4 165 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 EPG5Q9HCE0 2579 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 MPDZO75970 2070 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 PDLIM1O00151 329 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 NPIPB7O75200 414 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 TFPIP10646 304 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 FKBP2P26885 142 aaKnown RBP18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 SFTPDP35247 375 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 CRYZQ08257 329 aaKnown RBP18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 TRIP10Q15642 601 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 TMEM176BQ3YBM2 270 aaPredicted RBP18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 OTUD3Q5T2D3 398 aaPredicted RBP18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 ZNF770Q6IQ21 691 aaPredicted RBP18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 TRILQ7L0X0 811 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 STK32CQ86UX6 486 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 EPHX4Q8IUS5 362 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 OR10G2Q8NGC3 310 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 STK35Q8TDR2 534 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 SLC25A43Q8WUT9 341 aaPredicted RBP18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 SMPDL3BQ92485 455 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 DNAJA3Q96EY1 480 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 ARL5BQ96KC2 179 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 STOML1Q9UBI4 398 aa18.39■□□□□ 0.53
CDC42SE2-206ENST00000503291 DNAJC13O75165 2243 aa18.38■□□□□ 0.53
CDC42SE2-206ENST00000503291 SPENQ96T58 3664 aaKnown RBP18.38■□□□□ 0.53
CDC42SE2-206ENST00000503291 HCN1O60741 890 aa18.38■□□□□ 0.53
CDC42SE2-206ENST00000503291 SHC1P29353 583 aa18.38■□□□□ 0.53
CDC42SE2-206ENST00000503291 LRRC36Q1X8D7 754 aa18.38■□□□□ 0.53
CDC42SE2-206ENST00000503291 LPCAT4Q643R3 524 aa18.38■□□□□ 0.53
CDC42SE2-206ENST00000503291 ZER1Q7Z7L7 766 aa18.38■□□□□ 0.53
CDC42SE2-206ENST00000503291 LINC00471Q8N535 108 aa18.38■□□□□ 0.53
CDC42SE2-206ENST00000503291 EME1Q96AY2 570 aa18.38■□□□□ 0.53
CDC42SE2-206ENST00000503291 KLHL4Q9C0H6 718 aa18.38■□□□□ 0.53
CDC42SE2-206ENST00000503291 AP4B1Q9Y6B7 739 aa18.38■□□□□ 0.53
CDC42SE2-206ENST00000503291 GASTP01350 101 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 IFI30P13284 250 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 BMP7P18075 431 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 GCKP35557 465 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 RPS5P46782 204 aaKnown RBP18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 PRKCDQ05655 676 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 C1orf140Q5VVS0 124 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 MEX3DQ86XN8 651 aaKnown RBP18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 PIGXQ8TBF5 258 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 ABTB1Q969K4 478 aaPredicted RBP18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 SDCCAG3Q96C92 435 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 SNRNP40Q96DI7 357 aaKnown RBP18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 FEVQ99581 238 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 CASQ2O14958 399 aaPredicted RBP18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 POU3F2P20265 443 aaPredicted RBP18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 OMPP47874 163 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 CLK1P49759 484 aaKnown RBP18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 CTBP2P56545 445 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 CLDN20P56880 219 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 ANKRD34AQ69YU3 496 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 ZNF324BQ6AW86 544 aaPredicted RBP18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 VASNQ6EMK4 673 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 PGBD2Q6P3X8 592 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 C5orf46Q6UWT4 87 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 AQP11Q8NBQ7 271 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 FAR1Q8WVX9 515 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 TAAR8Q969N4 342 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 BPIFA2Q96DR5 249 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 OR5B2Q96R09 309 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 POTEKPQ9BYX7 375 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 PLSCR2Q9NRY7 297 aa18.37■□□□□ 0.53
CDC42SE2-206ENST00000503291 TRAV36DV7A0A075B6V5 113 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 ARRDC5A6NEK1 342 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 ENO4A6NNW6 628 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 ACTL6AO96019 429 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 POU2F1P14859 743 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 IFNGR2P38484 337 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 C19orf57Q0VDD7 668 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 NHSL2Q5HYW2 709 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 C1orf94Q6P1W5 598 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 ZBTB49Q6ZSB9 765 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 FAM46AQ96IP4 442 aaKnown RBP18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 C9orf16Q9BUW7 83 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 PTDSS2Q9BVG9 487 aa18.36■□□□□ 0.53
CDC42SE2-206ENST00000503291 SPRR3Q9UBC9 169 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms