RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 PHC1P78364 1004 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 LSM11P83369 360 aaKnown RBP eCLIP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 MERTKQ12866 999 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 FAPQ12884 760 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 CASP8Q14790 479 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 SLC17A1Q14916 467 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 GPR68Q15743 365 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 EFNB3Q15768 340 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ATAD3BQ5T9A4 648 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 SAXO2Q658L1 398 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 EMBQ6PCB8 327 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 UGT2A3Q6UWM9 527 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 FRRS1Q6ZNA5 592 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 LRRC74BQ6ZQY2 392 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 C16orf62Q7Z3J2 963 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ABHD12BQ7Z5M8 362 aaPredicted RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ANKRD46Q86W74 232 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF440Q8IYI8 595 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 C4orf33Q8N1A6 199 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 KRTCAP2Q8N6L1 136 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 TMCO5AQ8N6Q1 288 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 WDR31Q8NA23 367 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 MAPK1IP1LQ8NDC0 245 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 OR5D16Q8NGK9 328 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 UBLCP1Q8WVY7 318 aaPredicted RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 HPS1Q92902 700 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ROPN1LQ96C74 230 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 DDIT4LQ96D03 193 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 OTUB1Q96FW1 271 aaPredicted RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 MS4A3Q96HJ5 214 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ARL5BQ96KC2 179 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 SLC35G5Q96KT7 338 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 C3orf30Q96M34 536 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 TRNT1Q96Q11 434 aaKnown RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 NAA11Q9BSU3 229 aaPredicted RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 KATNB1Q9BVA0 655 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 BEX2Q9BXY8 128 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ADAM19Q9H013 955 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 SHARPINQ9H0F6 387 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 MTHFD2LQ9H903 347 aaPredicted RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 SSU72Q9NP77 194 aaKnown RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 SLC17A5Q9NRA2 495 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ZDHHC2Q9UIJ5 367 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 BTNL2Q9UIR0 455 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 MKLN1Q9UL63 735 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 WDR45Q9Y484 360 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 FKBP7Q9Y680 259 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ALPK2Q86TB3 2170 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 RNF103-CHMP3A0A140T963 221 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 AGAP5A6NIR3 686 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 CCT8L1PA6NM43 557 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 B9A039 149 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 RPL36A-HNRNPH2H7BZ11 118 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 HMGN4O00479 90 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 BIRC5O15392 142 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 CFLARO15519 480 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 TYROBPO43914 113 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 LMX1BO60663 402 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 SLU7O95391 586 aaKnown RBP5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 IGKV3-15P01624 115 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 GPIP06744 558 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 BPGMP07738 259 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 UBTFL6P0CB48 400 aaPredicted RBP5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 IGHV4-31P0DP07 118 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 EFNA1P20827 205 aaPredicted RBP5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 ARRB2P32121 409 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 NR4A2P43354 598 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 KHKP50053 298 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 PPOXP50336 477 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 PDLIM4P50479 330 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 FABP6P51161 128 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 CCR4P51679 360 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 POLR2HP52434 150 aaKnown RBP5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 SH3BGRP55822 239 aaPredicted RBP5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 PLAURQ03405 335 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 FUT5Q11128 374 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 GNA13Q14344 377 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 SQLEQ14534 574 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 MAPK14Q16539 360 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 MST1LQ2TV78 715 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 NDUFAF6Q330K2 333 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 OR4F3Q6IEY1 312 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 FAM166AQ6J272 317 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 OGFOD2Q6N063 350 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 B3GLCTQ6Y288 498 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 CCDC36Q8IYA8 594 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 UBE2J2Q8N2K1 259 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 ARFGAP2Q8N6H7 521 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF525Q8N782 197 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 TRIML2Q8N7C3 387 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF614Q8N883 585 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 NUP37Q8NFH4 326 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 OR52N5Q8NH56 324 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 RFWD2Q8NHY2 731 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF563Q8TA94 476 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 TCP10LQ8TDR4 215 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 EPS8L3Q8TE67 593 aaKnown RBP5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 TUBGCP3Q96CW5 907 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 C1orf159Q96HA4 380 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms