RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 C3orf33Q6P1S2 294 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 ARHGAP11AQ6P4F7 1023 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 TMEM154Q6P9G4 183 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 IL20RBQ6UXL0 311 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 DPY19L2P2Q6ZN68 376 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 C16orf47Q6ZP98 133 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 PTCHD4Q6ZW05 846 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 SLC46A3Q7Z3Q1 461 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 KIF18BQ86Y91 864 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 GTPBP8Q8N3Z3 284 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 SVOPQ8N4V2 548 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 SCAIQ8N9R8 606 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 ADPRHL1Q8NDY3 354 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 OR4K17Q8NGC6 315 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 PFN4Q8NHR9 129 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 TMEM163Q8TC26 289 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 RNF217Q8TC41 542 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 RFKQ969G6 155 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 DDIT4LQ96D03 193 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 C1GALT1C1Q96EU7 318 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 SH3YL1Q96HL8 342 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 THOC3Q96J01 351 aaKnown RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 SIGLEC11Q96RL6 698 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 PHOX2BQ99453 314 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 DPH1Q9BZG8 443 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 OR52D1Q9H346 318 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 UBQLN3Q9H347 655 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 LIN28AQ9H9Z2 209 aaKnown RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 TIMMDC1Q9NPL8 285 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 CMC2Q9NRP2 79 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 SERINC1Q9NRX5 453 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 C20orf141Q9NUB4 165 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 FKBP14Q9NWM8 211 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 DKK4Q9UBT3 224 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 CHRNA9Q9UGM1 479 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 IL17BQ9UHF5 180 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 RNF6Q9Y252 685 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 POLHQ9Y253 713 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 GVINP1Q7Z2Y8 2422 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 TMED7-TICAM2A0A0A6YYA0 188 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 CLCA1A8K7I4 914 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 BHLHE40O14503 412 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 DNPH1O43598 174 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 SUSD5O60279 629 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 PIP5K1CO60331 668 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 AHSA1O95433 338 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 CELA2AP08217 269 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 ASAH2BP0C7U1 165 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 POU1F1P28069 291 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 UQCRC1P31930 480 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 EGR4Q05215 589 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 SELENBP1Q13228 472 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 FHL1Q13642 323 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 SGCBQ16585 318 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 RSPO4Q2I0M5 234 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-216ENST00000502848 RNLSQ5VYX0 342 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 TIGD3Q6B0B8 471 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 DESI1Q6ICB0 168 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 LAIR2Q6ISS4 152 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 BORAQ6PGQ7 559 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 PRSS48Q7RTY5 328 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 MAMDC2Q7Z304 686 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-216ENST00000502848 ADGRG3Q86Y34 549 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 GID4Q8IVV7 300 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 GALNT16Q8N428 558 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 PSD4Q8NDX1 1056 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 OR8D4Q8NGM9 314 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 OR5M3Q8NGP4 307 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 MFSD8Q8NHS3 518 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 SNIP1Q8TAD8 396 aaKnown RBP8.23□□□□□ -1.09
NR1I3-216ENST00000502848 C9orf43Q8TAL5 461 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-216ENST00000502848 FCGR1BQ92637 280 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 FGF11Q92914 225 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 MYDGFQ969H8 173 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 SNX18Q96RF0 628 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 TUBA1CQ9BQE3 449 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 UTP23Q9BRU9 249 aaKnown RBP8.23□□□□□ -1.09
NR1I3-216ENST00000502848 TSSK6Q9BXA6 273 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 PLA2G12AQ9BZM1 189 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 FAM192AQ9GZU8 254 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 GALNT9Q9HCQ5 603 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 FANCFQ9NPI8 374 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 NPDC1Q9NQX5 325 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-216ENST00000502848 NANSQ9NR45 359 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 PLSCR2Q9NRY7 297 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 MRPS18AQ9NVS2 196 aaKnown RBP8.23□□□□□ -1.09
NR1I3-216ENST00000502848 QPCTLQ9NXS2 382 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 ZNF226Q9NYT6 803 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 PSORS1C1Q9UIG5 152 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 KLHL21Q9UJP4 597 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.23□□□□□ -1.09
NR1I3-216ENST00000502848 BOKQ9UMX3 212 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-216ENST00000502848 TMED7Q9Y3B3 224 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 RPL36Q9Y3U8 105 aaKnown RBP8.23□□□□□ -1.09
NR1I3-216ENST00000502848 PCDHGB5Q9Y5G0 923 aa8.23□□□□□ -1.09
NR1I3-216ENST00000502848 PTPRBP23467 1997 aa8.22□□□□□ -1.09
NR1I3-216ENST00000502848 SMIM31A0A1B0GVY4 71 aa8.22□□□□□ -1.09
NR1I3-216ENST00000502848 KDM4EB2RXH2 506 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-216ENST00000502848 SURF4O15260 269 aa8.22□□□□□ -1.09
NR1I3-216ENST00000502848 PRODHO43272 600 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms