RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 RPL7L1Q6DKI1 246 aaKnown RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 LRRC55Q6ZSA7 311 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 CPXM2Q8N436 756 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SYNPO2LQ9H987 977 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 LOC102723971A0A1B0GUV8 181 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SCGB1A1P11684 91 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 MTNR1AP48039 350 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 MRPS6P82932 125 aaKnown RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 OR8I2Q8N0Y5 310 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SUMF1Q8NBK3 374 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 OR2T4Q8NH00 348 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 TMED6Q8WW62 240 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 ADAP2Q9NPF8 381 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 TBX21Q9UL17 535 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 CUX1P39880 1505 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 TMEM94Q12767 1356 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 EDDM13A0A1B0GTR0 161 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 ALG1L2C9J202 215 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 PMM2O15305 246 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 MBTPS1Q14703 1052 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 LTC4SQ16873 150 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 NXPE4Q6UWF7 544 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 NECAP1Q8NC96 275 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 NANOS1Q8WY41 292 aaKnown RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SLC22A12Q96S37 553 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 CLEC5AQ9NY25 188 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 PEG3Q9GZU2 1588 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 NFKBIEO00221 500 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 PCDH7O60245 1069 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 ECI2O75521 394 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SAXO2Q658L1 398 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 OVCH2Q7RTZ1 564 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 ZNF511Q8NB15 262 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 DOHHQ9BU89 302 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 LHX5Q9H2C1 402 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 ADAP1O75689 374 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SULT1A1P50225 295 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 MRPL10Q7Z7H8 261 aaKnown RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 RBM45Q8IUH3 476 aaKnown RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 GNPDA2Q8TDQ7 276 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SRA1Q9HD15 236 aaKnown RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 OR1A1Q9P1Q5 309 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 PSMB6P28072 239 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 CRISP1P54107 249 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SNAI3Q3KNW1 292 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SLC16A10Q8TF71 515 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 PRRC1Q96M27 445 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 UHRF2Q96PU4 802 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 RCE1Q9Y256 329 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 MRPS33Q9Y291 106 aaKnown RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 PCDHA9Q9Y5H5 950 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SNRPGP15A8MWD9 76 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SPATA31C1P0DKV0 1188 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 ERVPABLB-1P60509 514 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SOX4Q06945 474 aaPredicted RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SCARF1Q14162 830 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 GID4Q8IVV7 300 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SYT3Q9BQG1 590 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 TSPAN16Q9UKR8 245 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 CPDO75976 1380 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 TROQ12816 1431 aaPredicted RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 TRBC2A0A5B9 178 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 HBQ1P09105 142 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 EVX1P49640 407 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SMAGPQ0VAQ4 97 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 OR51F2Q8NH61 342 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 RAET1EQ8TD07 263 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 RDH14Q9HBH5 336 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 HSBP1O75506 76 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 EEDO75530 441 aaKnown RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 PI4KAP42356 2102 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 RFX2P48378 723 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 RAB32Q13637 225 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 PLA1AQ53H76 456 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 NETO2Q8NC67 525 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 M1APQ8TC57 530 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SYT17Q9BSW7 474 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 RBM38Q9H0Z9 239 aaKnown RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 NGBQ9NPG2 151 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 TRAPPC4Q9Y296 219 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 FAM170BA6NMN3 283 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 LRP3O75074 770 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SCG5P05408 212 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 CLN3Q13286 438 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 CAPSQ13938 189 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 SLC35G5Q96KT7 338 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 ZNF426Q9BUY5 554 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 CFAP20Q9Y6A4 193 aaKnown RBP4.48□□□□□ -1.69
NEAT1-202ENST00000501122 TTC3P53804 2025 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 TGM5O43548 720 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 HTR1AP08908 422 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 RPA2P15927 270 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 MC5RP33032 325 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 ACVR1BP36896 505 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 PRLHRP49683 370 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 AMIGO3Q86WK7 504 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 C9orf62Q8N4C0 152 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 PGAM5Q96HS1 289 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 OR51I2Q9H344 312 aa4.48□□□□□ -1.69
NEAT1-202ENST00000501122 GCM1Q9NP62 436 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms