RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 ZNF675Q8TD23 568 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 SGCDQ92629 289 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 GTF2H4Q92759 462 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 DAZLQ92904 295 aaKnown RBP4.58□□□□□ -1.68
FXN-205ENST00000498653 RIT1Q92963 219 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 PHF21AQ96BD5 680 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 MOAP1Q96BY2 351 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 ROPN1LQ96C74 230 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 RCN3Q96D15 328 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 DUX5Q96PT3 197 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 LPAR4Q99677 370 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 INPP5KQ9BT40 448 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 SFXN3Q9BWM7 321 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 PAIP1Q9H074 479 aaKnown RBP4.58□□□□□ -1.68
FXN-205ENST00000498653 CXorf21Q9HAI6 301 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 IL1RL2Q9HB29 575 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 C3orf14Q9HBI5 128 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 TAS2R9Q9NYW1 312 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.58□□□□□ -1.68
FXN-205ENST00000498653 SPEF1Q9Y4P9 236 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 SNX8Q9Y5X2 465 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 CLCA3PQ9Y6N3 262 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 FAT2Q9NYQ8 4349 aa4.58□□□□□ -1.68
FXN-205ENST00000498653 A0A087WV62 115 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 RNF103-CHMP3A0A140T963 221 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 FRG2CA6NGY1 282 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 DNAJC9-AS1A6NH13 148 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 SAGE2PA6NJ88 616 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 EVPLLA8MZ36 301 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 PLOD2O00469 737 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 PLOD3O60568 738 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 HNRNPCL1O60812 293 aaKnown RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 COQ9O75208 318 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 KRT75O95678 551 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 KRT16P08779 473 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 IFI6P09912 130 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 CSF3P09919 207 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 CT62P0C5K7 136 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 T-ENOLP0DO92 83 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 MED14OSP0DP75 135 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 PPIBP23284 216 aaKnown RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 OMGP23515 440 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 PRTN3P24158 256 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 CDKN2CP42773 168 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 CCT3P49368 545 aaKnown RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 NUDT2P50583 147 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 RASSF2P50749 326 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 ANXA11P50995 505 aaKnown RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 PRKAG1P54619 331 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 DVL1P1P54792 670 aaPredicted RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 CDH15P55291 814 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 CORO7P57737 925 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 HBA1P69905 142 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 PRR5P85299 388 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 PLGLB1Q02325 96 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 MGAT2Q10469 447 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 BNIP1Q12981 228 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 EXT1Q16394 746 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 PRICKLE4Q2TBC4 344 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 TRMT5Q32P41 509 aaKnown RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 GTDC1Q4AE62 458 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 TRMT12Q53H54 448 aaKnown RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 ZNF628Q5EBL2 1059 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 LRIF1Q5T3J3 769 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 ZFAND6Q6FIF0 208 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 PAPD4Q6PIY7 484 aaKnown RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 TMEM107Q6UX40 140 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 C16orf89Q6UX73 402 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 HACD2Q6Y1H2 254 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 TMEM64Q6YI46 380 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 DGAT2L6Q6ZPD8 337 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 SZRD1Q7Z422 152 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 SLC22A16Q86VW1 577 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 OR2M7Q8NG81 312 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 OR7G2Q8NG99 324 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 OR7G1Q8NGA0 311 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 OR56A1Q8NGH5 318 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 PSMA8Q8TAA3 256 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 SLC2A12Q8TD20 617 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 DOK4Q8TEW6 326 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 PTPMT1Q8WUK0 201 aaPredicted RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 LRRC58Q96CX6 371 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 ELP4Q96EB1 424 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 SENP5Q96HI0 755 aaPredicted RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 FBXL20Q96IG2 436 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 CGREF1Q99674 301 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 SH3GL1Q99961 368 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 HOPXQ9BPY8 73 aaPredicted RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 SLC35A5Q9BS91 424 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 OR8D2Q9GZM6 311 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 RAD21L1Q9H4I0 556 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 CDCP1Q9H5V8 836 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 CXorf36Q9H7Y0 433 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 MMP25Q9NPA2 562 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 SERHLQ9NQF3 203 aa4.57□□□□□ -1.68
FXN-205ENST00000498653 SIRT3Q9NTG7 399 aaPredicted RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 ZCCHC3Q9NUD5 404 aaKnown RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 DDX18Q9NVP1 670 aaKnown RBP4.57□□□□□ -1.68
FXN-205ENST00000498653 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.57□□□□□ -1.68
FXN-205ENST00000498653 NDE1Q9NXR1 346 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms