RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SLC46A3Q7Z3Q1 461 aa12.82□□□□□ -0.36
TRAF4-212ENST00000498540 GRINAQ7Z429 371 aa12.82□□□□□ -0.36
TRAF4-212ENST00000498540 ADGRG3Q86Y34 549 aa12.82□□□□□ -0.36
TRAF4-212ENST00000498540 PPP3R2Q96LZ3 170 aa12.82□□□□□ -0.36
TRAF4-212ENST00000498540 C3orf30Q96M34 536 aa12.82□□□□□ -0.36
TRAF4-212ENST00000498540 C16orf45Q96MC5 204 aaPredicted RBP12.82□□□□□ -0.36
TRAF4-212ENST00000498540 VRK1Q99986 396 aaPredicted RBP12.82□□□□□ -0.36
TRAF4-212ENST00000498540 TXLNGYQ9BZA5 131 aa12.82□□□□□ -0.36
TRAF4-212ENST00000498540 SLC9A8Q9Y2E8 581 aa12.82□□□□□ -0.36
TRAF4-212ENST00000498540 KLF11O14901 512 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 ANKRD28O15084 1053 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 TCF21O43680 179 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 CDH2P19022 906 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-212ENST00000498540 IL2RGP31785 369 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 PRPS1P60891 318 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 HIKESHIQ53FT3 197 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 EMBQ6PCB8 327 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 BHLHB9Q6PI77 547 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 C16orf62Q7Z3J2 963 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 C6orf120Q7Z4R8 191 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 HMGN2P46Q86SG4 172 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 MEX3DQ86XN8 651 aaKnown RBP12.81□□□□□ -0.36
TRAF4-212ENST00000498540 RIMKLAQ8IXN7 391 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 CLECL1Q8IZS7 167 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 RFLNBQ8N5W9 214 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 NATD1Q8N6N6 113 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 AGR3Q8TD06 166 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 ANP32BQ92688 251 aaKnown RBP12.81□□□□□ -0.36
TRAF4-212ENST00000498540 SLC35G5Q96KT7 338 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 DUSP26Q9BV47 211 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 BHLHE41Q9C0J9 482 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-212ENST00000498540 MYOZ1Q9NP98 299 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-212ENST00000498540 TMEM181Q9P2C4 612 aa12.81□□□□□ -0.36
TRAF4-212ENST00000498540 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 RNF103-CHMP3A0A140T963 221 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 DUXAA6NLW8 204 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 CLDN24A6NM45 220 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 COPEO14579 308 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 TRIM13O60858 407 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 LYPLA1O75608 230 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-212ENST00000498540 WNT11O96014 354 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 SHBGP04278 402 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 FGF4P08620 206 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 IMPDH2P12268 514 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 MPGP29372 298 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 SERPINF1P36955 418 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 CLK1P49759 484 aaKnown RBP12.8□□□□□ -0.36
TRAF4-212ENST00000498540 TGFBR3Q03167 851 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 FUT5Q11128 374 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 SLC17A1Q14916 467 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 C6orf136Q5SQH8 315 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 IL23RQ5VWK5 629 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 TYW3Q6IPR3 259 aaKnown RBP12.8□□□□□ -0.36
TRAF4-212ENST00000498540 KLHL24Q6TFL4 600 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 SPATA19Q7Z5L4 167 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 C4orf33Q8N1A6 199 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-212ENST00000498540 PLA2G12AQ9BZM1 189 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 OR51I1Q9H343 314 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 CA10Q9NS85 328 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 PARPBPQ9NWS1 579 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 TRAPPC4Q9Y296 219 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 SLC35A3Q9Y2D2 325 aa12.8□□□□□ -0.36
TRAF4-212ENST00000498540 DYSFO75923 2080 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 TMEM72A0PK05 275 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 SMIM23A6NLE4 172 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 AP3D1O14617 1153 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 KRT4P19013 534 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 PRPS1L1P21108 318 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 SLC35A1P78382 337 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 ADIPOQQ15848 244 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 ZSWIM7Q19AV6 140 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 ATP6AP1LQ52LC2 224 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 FRRS1Q6ZNA5 592 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 CNPY4Q8N129 248 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 FNDC5Q8NAU1 212 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 MNS1Q8NEH6 495 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 ZG16BQ96DA0 208 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 SLC38A2Q96QD8 506 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 PRPF18Q99633 342 aaKnown RBP12.79□□□□□ -0.36
TRAF4-212ENST00000498540 WDR45Q9Y484 360 aa12.79□□□□□ -0.36
TRAF4-212ENST00000498540 TMED7-TICAM2A0A0A6YYA0 188 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 ZC3H12DA2A288 527 aaKnown RBP12.78□□□□□ -0.36
TRAF4-212ENST00000498540 B9A039 149 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 EIF1BO60739 113 aaKnown RBP12.78□□□□□ -0.36
TRAF4-212ENST00000498540 SKAP2O75563 359 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-212ENST00000498540 STAMBPO95630 424 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 OR4A8P0C604 315 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 OR12D1P0DN82 309 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 FKBP2P26885 142 aaKnown RBP12.78□□□□□ -0.36
TRAF4-212ENST00000498540 CFPP27918 469 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 ALDH3A1P30838 453 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 IDH2P48735 452 aaKnown RBP12.78□□□□□ -0.36
TRAF4-212ENST00000498540 PPOXP50336 477 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 PGS1Q32NB8 556 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 C1QTNF12Q5T7M4 302 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 OR4F3Q6IEY1 312 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 TNFAIP8L2Q6P589 184 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-212ENST00000498540 VHLLQ6RSH7 139 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 GSPT2Q8IYD1 628 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms