RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 ZNF814B7Z6K7 855 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 DNPH1O43598 174 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 PGM3O95394 542 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 PRG2P13727 222 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 EDNRAP25101 427 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 OR2B6P58173 313 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 KEAP1Q14145 624 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 TSC22D1Q15714 1073 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 ZSWIM7Q19AV6 140 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 WBP2NLQ6ICG8 309 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.32■□□□□ 0.2
HOXD11-202ENST00000498438 GALNT5Q7Z7M9 940 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 SERPINA11Q86U17 422 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 CADM2Q8N3J6 435 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 HS3ST6Q96QI5 342 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 OR10A4Q9H209 315 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 CXXC4Q9H2H0 198 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 ARMC7Q9H6L4 198 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 EMC3Q9P0I2 261 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 LEF1Q9UJU2 399 aaPredicted RBP16.32■□□□□ 0.2
HOXD11-202ENST00000498438 GMEB1Q9Y692 573 aa16.32■□□□□ 0.2
HOXD11-202ENST00000498438 IGKV3D-15A0A087WSY6 115 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 ZC3H12DA2A288 527 aaKnown RBP16.31■□□□□ 0.2
HOXD11-202ENST00000498438 ZNF716A6NP11 495 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 FRS3O43559 492 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 RAMP1O60894 148 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 ADAP00813 363 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 IMPDH2P12268 514 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 ETS2P15036 469 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 CXCR1P25024 350 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 LOXP28300 417 aaPredicted RBP16.31■□□□□ 0.2
HOXD11-202ENST00000498438 MAP2K6P52564 334 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 COPZ1P61923 177 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 PDK3Q15120 406 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 DLEU7Q6UYE1 221 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 DHDDSQ86SQ9 333 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 WFDC8Q8IUA0 241 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 STEAP2Q8NFT2 490 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 PIGXQ8TBF5 258 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 S100PBPQ96BU1 408 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 MBD6Q96DN6 1003 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 ALPK1Q96QP1 1244 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 CPPED1Q9BRF8 314 aaPredicted RBP16.31■□□□□ 0.2
HOXD11-202ENST00000498438 PRSS50Q9UI38 385 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 CORO2BQ9UQ03 480 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 TRAPPC4Q9Y296 219 aa16.31■□□□□ 0.2
HOXD11-202ENST00000498438 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.3■□□□□ 0.2
HOXD11-202ENST00000498438 EVPLLA8MZ36 301 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 ANGPT2O15123 496 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 KLF4O43474 513 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 IL32P24001 234 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 SLC35A1P78382 337 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 CDK6Q00534 326 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 BEX5Q5H9J7 111 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 SFRP5Q5T4F7 317 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 REEP3Q6NUK4 255 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 Q6ZT83 130 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 RETREG3Q86VR2 466 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 CCDC103Q8IW40 242 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 ZNF100Q8IYN0 542 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 KISS1RQ969F8 398 aaPredicted RBP16.3■□□□□ 0.2
HOXD11-202ENST00000498438 TMEM120AQ9BXJ8 343 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 HDHD5Q9BXW7 423 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 PRDM4Q9UKN5 801 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 NDUFAF1Q9Y375 327 aa16.3■□□□□ 0.2
HOXD11-202ENST00000498438 EIF1BO60739 113 aaKnown RBP16.29■□□□□ 0.2
HOXD11-202ENST00000498438 GPX2P18283 190 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 CD53P19397 219 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 IDUAP35475 653 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 SLC16A1P53985 500 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 H3F3AP84243 136 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 HOXC5Q00444 222 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 BNIP2Q12982 314 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 ITGADQ13349 1161 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 SCARB2Q14108 478 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 P2RY6Q15077 328 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 DEFB113Q30KQ7 82 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 ALKBH2Q6NS38 261 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 DPP10Q8N608 796 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 C3orf49Q96BT1 292 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 RSPO3Q9BXY4 272 aaPredicted RBP16.29■□□□□ 0.2
HOXD11-202ENST00000498438 TMEM38AQ9H6F2 299 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 UBTD1Q9HAC8 227 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 FGFR1OP2Q9NVK5 253 aa16.29■□□□□ 0.2
HOXD11-202ENST00000498438 NOSIPQ9Y314 301 aaKnown RBP16.29■□□□□ 0.2
HOXD11-202ENST00000498438 RAI1Q7Z5J4 1906 aaPredicted RBP16.29■□□□□ 0.2
HOXD11-202ENST00000498438 ZNF469Q96JG9 3925 aaPredicted RBP16.28■□□□□ 0.2
HOXD11-202ENST00000498438 GPR171O14626 319 aa16.28■□□□□ 0.2
HOXD11-202ENST00000498438 LYZL6O75951 148 aa16.28■□□□□ 0.2
HOXD11-202ENST00000498438 TROVE2P10155 538 aaKnown RBP eCLIP16.28■□□□□ 0.2
HOXD11-202ENST00000498438 FPR1P21462 350 aa16.28■□□□□ 0.2
HOXD11-202ENST00000498438 PRKAR1BP31321 381 aa16.28■□□□□ 0.2
HOXD11-202ENST00000498438 ADRM1Q16186 407 aa16.28■□□□□ 0.2
HOXD11-202ENST00000498438 RUNDC3AQ59EK9 446 aa16.28■□□□□ 0.2
HOXD11-202ENST00000498438 METTL21CQ5VZV1 264 aa16.28■□□□□ 0.2
HOXD11-202ENST00000498438 BHLHA15Q7RTS1 189 aaPredicted RBP16.28■□□□□ 0.2
HOXD11-202ENST00000498438 COMTD1Q86VU5 262 aa16.28■□□□□ 0.2
HOXD11-202ENST00000498438 KRT73Q86Y46 540 aa16.28■□□□□ 0.2
HOXD11-202ENST00000498438 SLC35B4Q969S0 331 aa16.28■□□□□ 0.2
HOXD11-202ENST00000498438 PLPPR2Q96GM1 343 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms