RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 EXOC1LA0A1B0GW35 172 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 NPIPB9F8W1W9 429 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 LYNX1G3V0Z9 82 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 H3BQF6 201 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 ANKRD28O15084 1053 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 CFLARO15519 480 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 DNPH1O43598 174 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 MSMBP08118 114 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 LYNX1P0DP58 116 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 UROSP10746 265 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 MYL2P10916 166 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 EPHA1P21709 976 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 ASMTP46597 345 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 LIMS1P48059 325 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 TUBA1BP68363 451 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 TUBA4AP68366 448 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 NAAAQ02083 359 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 KIAA0040Q15053 153 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 GALNTL6Q49A17 601 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 C1QTNF12Q5T7M4 302 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 LIPMQ5VYY2 423 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 C8orf74Q6P047 294 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 FAHD2BQ6P2I3 314 aaPredicted RBP10.12□□□□□ -0.79
CDK9-205ENST00000498339 TUBA1AQ71U36 451 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 EIF3MQ7L2H7 374 aaKnown RBP10.12□□□□□ -0.79
CDK9-205ENST00000498339 AAED1Q7RTV5 226 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 OR5AK3PQ8NH89 298 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 CCDC126Q96EE4 140 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 FAHD2AQ96GK7 314 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 METTL2AQ96IZ6 378 aaKnown RBP10.12□□□□□ -0.79
CDK9-205ENST00000498339 KCNF1Q9H3M0 494 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 OBP2BQ9NPH6 170 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 ZDHHC18Q9NUE0 388 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 TMEM181Q9P2C4 612 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 PCDHGB1Q9Y5G3 927 aa10.12□□□□□ -0.79
CDK9-205ENST00000498339 A0A087WUV0 522 aaPredicted RBP10.11□□□□□ -0.79
CDK9-205ENST00000498339 CENPVL1A0A0U1RR11 272 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 ZNF587BE7ETH6 402 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 NPIPB8E9PQR5 432 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 SCAMP2O15127 329 aaKnown RBP10.11□□□□□ -0.79
CDK9-205ENST00000498339 TMPRSS2O15393 492 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 EIF1BO60739 113 aaKnown RBP10.11□□□□□ -0.79
CDK9-205ENST00000498339 C6orf47O95873 294 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 LGI1O95970 557 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 CECR9P0C854 216 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 SAGP10523 405 aaPredicted RBP10.11□□□□□ -0.79
CDK9-205ENST00000498339 NEFHP12036 1026 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 NPR2P20594 1047 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 PRPH2P23942 346 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 CALCRP30988 508 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 GPR6P46095 362 aaPredicted RBP10.11□□□□□ -0.79
CDK9-205ENST00000498339 RPS26P62854 115 aaKnown RBP10.11□□□□□ -0.79
CDK9-205ENST00000498339 SLC35A1P78382 337 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 RIN1Q13671 783 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 TBRG1Q3YBR2 411 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 MIDNQ504T8 468 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 FRMD7Q6ZUT3 714 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 C16orf62Q7Z3J2 963 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 GRINAQ7Z429 371 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 LCA5Q86VQ0 697 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 POMGNT2Q8NAT1 580 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 OR7A2PQ8NGA2 310 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 OR4F15Q8NGB8 312 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 OR51F2Q8NH61 342 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 CLDND2Q8NHS1 167 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 CKAP2Q8WWK9 683 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 DDIT4LQ96D03 193 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 MTERF3Q96E29 417 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 ANKRD27Q96NW4 1050 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 ALKBH3Q96Q83 286 aaPredicted RBP10.11□□□□□ -0.79
CDK9-205ENST00000498339 SDF2Q99470 211 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 CCDC106Q9BWC9 280 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 FUT8Q9BYC5 575 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 NMUR2Q9GZQ4 415 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 TNFRSF12AQ9NP84 129 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 TMEM45AQ9NWC5 275 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 MKLN1Q9UL63 735 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 SPEF1Q9Y4P9 236 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 PKD1L1Q8TDX9 2849 aa10.11□□□□□ -0.79
CDK9-205ENST00000498339 A0A0G2JK05 382 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 STX11O75558 287 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 CHEK2O96017 543 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 PNPP00491 289 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 ADRA2AP08913 450 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 THBS4P35443 961 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 RPL3P39023 403 aaKnown RBP10.1□□□□□ -0.79
CDK9-205ENST00000498339 FAM153CQ494X1 144 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 RFTN2Q52LD8 501 aaPredicted RBP10.1□□□□□ -0.79
CDK9-205ENST00000498339 OTUD3Q5T2D3 398 aaPredicted RBP10.1□□□□□ -0.79
CDK9-205ENST00000498339 ANKRD16Q6P6B7 361 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 SHISA2Q6UWI4 295 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 USP43Q70EL4 1123 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 OLIG3Q7RTU3 272 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 GPAT4Q86UL3 456 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 LSRQ86X29 649 aaPredicted RBP10.1□□□□□ -0.79
CDK9-205ENST00000498339 DDIASQ8IXT1 998 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 CDK20Q8IZL9 346 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 BPIFB2Q8N4F0 458 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 TEX29Q8N6K0 151 aa10.1□□□□□ -0.79
CDK9-205ENST00000498339 CCDC63Q8NA47 563 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms