RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 A0A1W2PNR3 127 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 HNRNPCL2B2RXH8 293 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 HNRNPCL3B7ZW38 293 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 NME4O00746 187 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 HNRNPCL1O60812 293 aaKnown RBP13.68□□□□□ -0.22
NUP50-219ENST00000497960 PRKD3O94806 890 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 HRGP04196 525 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 DBIP07108 87 aaKnown RBP13.68□□□□□ -0.22
NUP50-219ENST00000497960 HNRNPCL4P0DMR1 293 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 IL7RP16871 459 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 DNASE1P24855 282 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 AQP1P29972 269 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 AGTR1P30556 359 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 APOBEC1P41238 236 aaKnown RBP13.68□□□□□ -0.22
NUP50-219ENST00000497960 ART1P52961 327 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 LIPEQ05469 1076 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 POU4F3Q15319 338 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 VMACQ2NL98 169 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 LIN52Q52LA3 116 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 BEND4Q6ZU67 534 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 PLEKHM3Q6ZWE6 761 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 KRT73Q86Y46 540 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 SLC15A3Q8IY34 581 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 DEFB107AQ8IZN7 70 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 SLC43A2Q8N370 569 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 RBM15BQ8NDT2 890 aaKnown RBP13.68□□□□□ -0.22
NUP50-219ENST00000497960 OR2T12Q8NG77 320 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 SLC25A43Q8WUT9 341 aaPredicted RBP13.68□□□□□ -0.22
NUP50-219ENST00000497960 OR5B2Q96R09 309 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 ALG2Q9H553 416 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 GP6Q9HCN6 339 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 KLHL28Q9NXS3 571 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 ABCD2Q9UBJ2 740 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 USP22Q9UPT9 525 aa13.68□□□□□ -0.22
NUP50-219ENST00000497960 CLDN24A6NM45 220 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 B2RBV5 119 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 BCAS1O75363 584 aaPredicted RBP13.67□□□□□ -0.22
NUP50-219ENST00000497960 PGM3O95394 542 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 TFPIP10646 304 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 UQCRBP14927 111 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 RPS4Y1P22090 263 aaKnown RBP13.67□□□□□ -0.22
NUP50-219ENST00000497960 IST1P53990 364 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 TESK1Q15569 626 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 ADRM1Q16186 407 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 SYT14P1Q58G82 188 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 INTS11Q5TA45 600 aaKnown RBP13.67□□□□□ -0.22
NUP50-219ENST00000497960 RINLQ6ZS11 566 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 GRINAQ7Z429 371 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 CALHM3Q86XJ0 350 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 OR52P1PQ8NH57 321 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 CNOT9Q92600 299 aaKnown RBP13.67□□□□□ -0.22
NUP50-219ENST00000497960 ZNF607Q96SK3 696 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 KCTD14Q9BQ13 255 aaPredicted RBP13.67□□□□□ -0.22
NUP50-219ENST00000497960 TACO1Q9BSH4 297 aaKnown RBP13.67□□□□□ -0.22
NUP50-219ENST00000497960 LIME1Q9H400 295 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 C12orf49Q9H741 205 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 KLHL9Q9P2J3 617 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 KLHL13Q9P2N7 655 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 ZNF443Q9Y2A4 671 aaPredicted RBP13.67□□□□□ -0.22
NUP50-219ENST00000497960 PLEKHA6Q9Y2H5 1048 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 OTOGQ6ZRI0 2925 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 CSMD2Q7Z408 3487 aa13.67□□□□□ -0.22
NUP50-219ENST00000497960 TEP1Q99973 2627 aaKnown RBP13.66□□□□□ -0.22
NUP50-219ENST00000497960 ELOVL7A1L3X0 281 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 YES1P07947 543 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 T-ENOLP0DO92 83 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 NID1P14543 1247 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 ETS2P15036 469 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 PPP3CBP16298 524 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 ENPP1P22413 925 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 FKBP2P26885 142 aaKnown RBP13.66□□□□□ -0.22
NUP50-219ENST00000497960 CCKARP32238 428 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 HTR3AP46098 478 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 IDH2P48735 452 aaKnown RBP13.66□□□□□ -0.22
NUP50-219ENST00000497960 GSK3BP49841 420 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 GZMMP51124 257 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 CSNK2A1P68400 391 aaPredicted RBP13.66□□□□□ -0.22
NUP50-219ENST00000497960 LARS2Q15031 903 aaKnown RBP13.66□□□□□ -0.22
NUP50-219ENST00000497960 SPNS3Q6ZMD2 512 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 ZNF836Q6ZNA1 936 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 TMPPEQ6ZT21 453 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 ZNF550Q7Z398 422 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 VRK2Q86Y07 508 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 TUSC5Q8IXB3 177 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 ZNF440Q8IYI8 595 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 MICU2Q8IYU8 434 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 ZNF583Q96ND8 569 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 SPATA5L1Q9BVQ7 753 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 BCL2L10Q9HD36 194 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 CTPS2Q9NRF8 586 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 CCM2LQ9NUG4 571 aaPredicted RBP13.66□□□□□ -0.22
NUP50-219ENST00000497960 TMEM181Q9P2C4 612 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 CHRNA9Q9UGM1 479 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 IFT52Q9Y366 437 aa13.66□□□□□ -0.22
NUP50-219ENST00000497960 IGHV3-15A0A0B4J1V0 119 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 CFAP73A6NFT4 308 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 SULT2B1O00204 365 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 GSTA4O15217 222 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 OPN1SWP03999 348 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 THBS1P07996 1170 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms