RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 FAM57AQ8TBR7 257 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 PHF10Q8WUB8 498 aaKnown RBP18.04■□□□□ 0.48
CTSD-206ENST00000497544 SLC25A43Q8WUT9 341 aaPredicted RBP18.04■□□□□ 0.48
CTSD-206ENST00000497544 SLC41A3Q96GZ6 507 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 C7orf34Q96L11 122 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 PRRC1Q96M27 445 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 FNDC11Q9BVV2 318 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 C12orf10Q9HB07 376 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 RIMS3Q9UJD0 308 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 AURKCQ9UQB9 309 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 NAV3Q8IVL0 2385 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 TMEM72A0PK05 275 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 SEC14L5O43304 696 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 SLC19A2O60779 497 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 OR5F1O95221 314 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 FABP3P05413 133 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 ZNF708P17019 499 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 RHCEP18577 417 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 ST3GAL3Q11203 375 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 FOXD4Q12950 439 aaPredicted RBP18.03■□□□□ 0.48
CTSD-206ENST00000497544 PDSS1Q5T2R2 415 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 SLC38A4Q969I6 547 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 RELTQ969Z4 430 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 DDIT4LQ96D03 193 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 RSRC1Q96IZ7 334 aaKnown RBP18.03■□□□□ 0.48
CTSD-206ENST00000497544 IL1RAPQ9NPH3 570 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 NDUFAF4Q9P032 175 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 SLC7A7Q9UM01 511 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 ZNF835Q9Y2P0 537 aa18.03■□□□□ 0.48
CTSD-206ENST00000497544 A0A087WUJ7 227 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 DHRS12A0PJE2 317 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 AHRRA9YTQ3 701 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 H0Y3Z8 333 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 J3KTA2 159 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 EIF1AYO14602 144 aaKnown RBP18.02■□□□□ 0.48
CTSD-206ENST00000497544 ZNF208O43345 1280 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 CHP2O43745 196 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 SEMG1P04279 462 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 SLC7A1P30825 629 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 CLK1P49759 484 aaKnown RBP18.02■□□□□ 0.48
CTSD-206ENST00000497544 ERFP50548 548 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 SUCLG1P53597 346 aaKnown RBP18.02■□□□□ 0.48
CTSD-206ENST00000497544 CASP6P55212 293 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 CLDN18P56856 261 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 CLDN20P56880 219 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 RPS3AP61247 264 aaKnown RBP18.02■□□□□ 0.48
CTSD-206ENST00000497544 VLDLRP98155 873 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 SF3B4Q15427 424 aaKnown RBP eCLIP18.02■□□□□ 0.484e-11■■■□□ 17.2
CTSD-206ENST00000497544 C3AR1Q16581 482 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 SYT14P1Q58G82 188 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 SWT1Q5T5J6 900 aaKnown RBP18.02■□□□□ 0.48
CTSD-206ENST00000497544 ZNF585AQ6P3V2 769 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 ESPNLQ6ZVH7 1005 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 GDF7Q7Z4P5 450 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 CANT1Q8WVQ1 401 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 MPP4Q96JB8 637 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 KLHL15Q96M94 604 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 ZNF300Q96RE9 604 aaPredicted RBP18.02■□□□□ 0.48
CTSD-206ENST00000497544 PRDM14Q9GZV8 571 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 PNPLA3Q9NST1 481 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 A4GNTQ9UNA3 340 aa18.02■□□□□ 0.48
CTSD-206ENST00000497544 A0A0J9YW62 118 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 TCRBV3S1A0A5B6 114 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 A8MVM7 634 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 GPIP06744 558 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 RAP2AP10114 183 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 THRBP10828 461 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 GABRA1P14867 456 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 HOXB6P17509 224 aaKnown RBP18.01■□□□□ 0.47
CTSD-206ENST00000497544 MRPL49Q13405 166 aaKnown RBP18.01■□□□□ 0.47
CTSD-206ENST00000497544 SGCBQ16585 318 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 Q6ZPB1 254 aaPredicted RBP18.01■□□□□ 0.47
CTSD-206ENST00000497544 TSEN54Q7Z6J9 526 aaKnown RBP18.01■□□□□ 0.47
CTSD-206ENST00000497544 CD163Q86VB7 1156 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 TSPYL5Q86VY4 417 aaPredicted RBP18.01■□□□□ 0.47
CTSD-206ENST00000497544 ADGRG5Q8IZF4 528 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 STK35Q8TDR2 534 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 OR5B2Q96R09 309 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 ZNF347Q96SE7 839 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 RHCGQ9UBD6 479 aa18.01■□□□□ 0.47
CTSD-206ENST00000497544 A0A1W2PNR3 127 aa18■□□□□ 0.47
CTSD-206ENST00000497544 DIRAS1O95057 198 aa18■□□□□ 0.47
CTSD-206ENST00000497544 SHC1P29353 583 aa18■□□□□ 0.47
CTSD-206ENST00000497544 CARD18P57730 90 aa18■□□□□ 0.47
CTSD-206ENST00000497544 HBMQ6B0K9 141 aa18■□□□□ 0.47
CTSD-206ENST00000497544 TTC33Q6PID6 262 aaPredicted RBP18■□□□□ 0.47
CTSD-206ENST00000497544 PIWIL3Q7Z3Z3 882 aaKnown RBP18■□□□□ 0.47
CTSD-206ENST00000497544 OR2V1Q8NHB1 315 aa18■□□□□ 0.47
CTSD-206ENST00000497544 OSTF1Q92882 214 aa18■□□□□ 0.47
CTSD-206ENST00000497544 PIP5K1AQ99755 562 aa18■□□□□ 0.47
CTSD-206ENST00000497544 POTEKPQ9BYX7 375 aa18■□□□□ 0.47
CTSD-206ENST00000497544 OR11A1Q9GZK7 315 aa18■□□□□ 0.47
CTSD-206ENST00000497544 PAQR5Q9NXK6 330 aaPredicted RBP18■□□□□ 0.47
CTSD-206ENST00000497544 OSGIN2Q9Y236 505 aa18■□□□□ 0.47
CTSD-206ENST00000497544 HDGFL3Q9Y3E1 203 aa18■□□□□ 0.47
CTSD-206ENST00000497544 PRRC2CQ9Y520 2896 aaKnown RBP17.99■□□□□ 0.47
CTSD-206ENST00000497544 TRGV8A0A0C4DH27 118 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 FIGNL2A6NMB9 653 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 H0YC42 278 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 TNFSF11O14788 317 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms