RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 DGAT2L7PQ6IED9 249 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PRSS55Q6UWB4 352 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 C11orf57Q6ZUT1 292 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF572Q7Z3I7 529 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 DHDDSQ86SQ9 333 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 UNC93AQ86WB7 457 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 COMMD2Q86X83 199 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CRLF3Q8IUI8 442 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM219AQ8IW50 185 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 YAF2Q8IY57 180 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CMTM4Q8IZR5 234 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 TCTE3Q8IZS6 198 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 LCORLQ8N3X6 602 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 Q8N402 240 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CPXM2Q8N436 756 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 NLGN4YQ8NFZ3 816 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CADM4Q8NFZ8 388 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 OR4F15Q8NGB8 312 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 COQ8AQ8NI60 647 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 LPAR1Q92633 364 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 FCGR1BQ92637 280 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 MYLPFQ96A32 169 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ANKRD9Q96BM1 317 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ZBED6CLQ96FA7 236 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 LRR1Q96L50 414 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 LINC00052Q96N35 136 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ERGIC2Q96RQ1 377 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 TIMM29Q9BSF4 260 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 MECRQ9BV79 373 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 FSD1LQ9BXM9 530 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PORCNQ9H237 461 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 HRH4Q9H3N8 390 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 IL1RL2Q9HB29 575 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 WSB2Q9NYS7 404 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 STOX2Q9P2F5 926 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 KIF25Q9UIL4 384 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC25A13Q9UJS0 675 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 FZD4Q9ULV1 537 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 RCE1Q9Y256 329 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SF3B1O75533 1304 aaKnown RBP eCLIP2.85□□□□□ -1.953e-6■■■■■ 44.6
SNRNP48-202ENST00000496946 KDM5DQ9BY66 1539 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PLA2R1Q13018 1463 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 OVOS2A0A0G2JMS6 1433 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 OVOS2A0A0J9YW53 1432 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 BLMP54132 1417 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 OVOS2Q6IE36 1432 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 TCRBV7S2A1N4TA0A589 114 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CDHR4A6H8M9 788 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CXorf65A6NEN9 183 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 A8MZ25 164 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 C1orf196B1AJZ1 125 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 C5orf58C9J3I9 102 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 NARSO43776 548 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 RP2O75695 350 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ATG12O94817 140 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 AP2A2O94973 939 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 KCNK2O95069 426 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ABHD16AO95870 558 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CST4P01036 141 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 VIPP01282 170 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 JUNP05412 331 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 OR8U8P0C7N1 319 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CPN1P15169 458 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ADRA2CP18825 462 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PVALBP20472 110 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 MALP21145 153 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ANOS1P23352 680 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ACKR3P25106 362 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 KLRC1P26715 233 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 KDELR2P33947 212 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 OPRL1P41146 370 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PTH2RP49190 550 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 EVX1P49640 407 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CAMPP49913 170 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 MTHFSP49914 203 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 GALCP54803 685 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 AQP4P55087 323 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 WNT4P56705 351 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 DEFA1P59665 94 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 DEFA3P59666 94 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SNRPEP62304 92 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SELENOTP62341 195 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM3AP98173 230 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CDKL1Q00532 357 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 MAD2L1Q13257 205 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PDE7AQ13946 482 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 KRT33BQ14525 404 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CARTPTQ16568 116 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ASTE1Q2TB18 679 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC22A6Q4U2R8 563 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SFT2D3Q587I9 215 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC25A53Q5H9E4 307 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF766Q5HY98 468 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SPIN3Q5JUX0 258 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 RBM48Q5RL73 367 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 OTUD1Q5VV17 481 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 LRRC8EQ6NSJ5 796 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 DLK2Q6UY11 383 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 LINGO4Q6UY18 593 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ASCL4Q6XD76 172 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms