RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 TRIM2Q9C040 744 aa11.43□□□□□ -0.58
FN1-226ENST00000496542 NPAP1Q9NZP6 1156 aa11.43□□□□□ -0.58
FN1-226ENST00000496542 TMED7Q9Y3B3 224 aa11.43□□□□□ -0.58
FN1-226ENST00000496542 GPR45Q9Y5Y3 372 aa11.43□□□□□ -0.58
FN1-226ENST00000496542 COL6A5A8TX70 2615 aa11.43□□□□□ -0.58
FN1-226ENST00000496542 CR1P17927 2039 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 TMEM72A0PK05 275 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 OR5H1A6NKK0 313 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 SHISA9B4DS77 424 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 INAFM1C9JVW0 142 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 OVOL3O00110 214 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 GPR171O14626 319 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 ABCD4O14678 606 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 DNPH1O43598 174 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 MRPL33O75394 65 aaKnown RBP11.42□□□□□ -0.58
FN1-226ENST00000496542 UQCRBP14927 111 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 IL7RP16871 459 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 FKBP2P26885 142 aaKnown RBP11.42□□□□□ -0.58
FN1-226ENST00000496542 TACR3P29371 465 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 MAGEA8P43361 318 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 HTR3AP46098 478 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 CLK1P49759 484 aaKnown RBP11.42□□□□□ -0.58
FN1-226ENST00000496542 TXNL4AP83876 142 aaKnown RBP11.42□□□□□ -0.58
FN1-226ENST00000496542 LRRC74AQ0VAA2 488 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 GNA13Q14344 377 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 PGGHGQ32M88 737 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 MRPL2Q5T653 305 aaKnown RBP11.42□□□□□ -0.58
FN1-226ENST00000496542 CASP12Q6UXS9 341 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 P2RY8Q86VZ1 359 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 MAPK1IP1LQ8NDC0 245 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 OR52N5Q8NH56 324 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 DDIT4LQ96D03 193 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 ALG2Q9H553 416 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 THAP1Q9NVV9 213 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 CISD1Q9NZ45 108 aaKnown RBP11.42□□□□□ -0.58
FN1-226ENST00000496542 TMEM181Q9P2C4 612 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 OSGIN1Q9UJX0 560 aa11.42□□□□□ -0.58
FN1-226ENST00000496542 A0A1W2PR80 420 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 ZC3H12DA2A288 527 aaKnown RBP11.41□□□□□ -0.58
FN1-226ENST00000496542 CFAP73A6NFT4 308 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 RFXANKO14593 260 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 SNNO75324 88 aaPredicted RBP11.41□□□□□ -0.58
FN1-226ENST00000496542 PGM3O95394 542 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 KRT75O95678 551 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 DBIP07108 87 aaKnown RBP11.41□□□□□ -0.58
FN1-226ENST00000496542 PTNP21246 168 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 RPS4Y1P22090 263 aaKnown RBP11.41□□□□□ -0.58
FN1-226ENST00000496542 NTF4P34130 210 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 SLC1A3P43003 542 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 ZNF83P51522 516 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 SLC16A1P53985 500 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 SLC35A1P78382 337 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 EPS8Q12929 822 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 ETFDHQ16134 617 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 C9orf135Q5VTT2 229 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 SSX8Q7RTT4 187 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 PEX5LQ8IYB4 626 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 GLB1L3Q8NCI6 653 aaPredicted RBP11.41□□□□□ -0.58
FN1-226ENST00000496542 NAA11Q9BSU3 229 aaPredicted RBP11.41□□□□□ -0.58
FN1-226ENST00000496542 TRAF4Q9BUZ4 470 aaPredicted RBP11.41□□□□□ -0.58
FN1-226ENST00000496542 MTHFD2LQ9H903 347 aaPredicted RBP11.41□□□□□ -0.58
FN1-226ENST00000496542 SLC6A13Q9NSD5 602 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 FAIMQ9NVQ4 179 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 ASB6Q9NWX5 421 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 NKIRAS1Q9NYS0 192 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 P2RX2Q9UBL9 471 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 TRAPPC4Q9Y296 219 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 DNHD1Q96M86 4753 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 RTTNQ86VV8 2226 aa11.41□□□□□ -0.58
FN1-226ENST00000496542 FAAHO00519 579 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 ZNF208O43345 1280 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 ZNF500O60304 480 aaPredicted RBP11.4□□□□□ -0.58
FN1-226ENST00000496542 EIF1BO60739 113 aaKnown RBP11.4□□□□□ -0.58
FN1-226ENST00000496542 SLC22A3O75751 556 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 ANP32DO95626 131 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 IGHV4-39P01824 125 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 IL6P05231 212 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 GKN3PP0CG01 181 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 IMPDH2P12268 514 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 ETFAP13804 333 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 IDO1P14902 403 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 IDUAP35475 653 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 ACVR1BP36896 505 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 CRATP43155 626 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 FOXG1P55316 489 aaPredicted RBP11.4□□□□□ -0.58
FN1-226ENST00000496542 SPOCK1Q08629 439 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 SLC9B1Q4ZJI4 515 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 PDCD4Q53EL6 469 aaKnown RBP11.4□□□□□ -0.58
FN1-226ENST00000496542 ATG16L1Q676U5 607 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 KLHL17Q6TDP4 642 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 TMEM108Q6UXF1 575 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 ZNF836Q6ZNA1 936 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 VRK2Q86Y07 508 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 ZNF440Q8IYI8 595 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 OR52E4Q8NGH9 312 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 PMM1Q92871 262 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 HS6ST2Q96MM7 605 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 SLCO5A1Q9H2Y9 848 aa11.4□□□□□ -0.58
FN1-226ENST00000496542 RLIMQ9NVW2 624 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms