RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 OR9A1PQ8NGU1 263 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 ZNF564Q8TBZ8 553 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-212ENST00000496458 OSTF1Q92882 214 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 IFT74Q96LB3 600 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 GPR137Q96N19 417 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 NPY6RQ99463 290 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 FAM173AQ9BQD7 235 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 RIOK1Q9BRS2 568 aaKnown RBP3.91□□□□□ -1.78
SF3B1-212ENST00000496458 CBWD1Q9BRT8 395 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 GPR174Q9BXC1 333 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 TRIM9Q9C026 710 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 TDRD3Q9H7E2 651 aaKnown RBP3.91□□□□□ -1.78
SF3B1-212ENST00000496458 BATF3Q9NR55 127 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 ACOXLQ9NUZ1 547 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 QPCTLQ9NXS2 382 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 RNF14Q9UBS8 474 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 TUBGCP4Q9UGJ1 667 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 FOXJ3Q9UPW0 622 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 SLC9A8Q9Y2E8 581 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 LRP6O75581 1613 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 SBNO1A3KN83 1393 aa3.9□□□□□ -1.78
SF3B1-212ENST00000496458 POLR3AO14802 1390 aaPredicted RBP3.9□□□□□ -1.78
SF3B1-212ENST00000496458 ARHGEF10O15013 1369 aa3.9□□□□□ -1.78
SF3B1-212ENST00000496458 TNS3Q68CZ2 1445 aa3.9□□□□□ -1.78
SF3B1-212ENST00000496458 WASH3PC4AMC7 463 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 HSBP1L1C9JCN9 74 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 CYB561D2O14569 222 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 FCMRO60667 390 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 NDUFB10O96000 172 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 CA3P07451 260 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 SERPINF2P08697 491 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 PABPC4LP0CB38 370 aaKnown RBP3.9□□□□□ -1.79
SF3B1-212ENST00000496458 GNSP15586 552 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 ZNF44P15621 663 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 ZNF24P17028 368 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 HNF1AP20823 631 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 FCARP24071 287 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 AXLP30530 894 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 DLSTP36957 453 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 NUP62P37198 522 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-212ENST00000496458 GRIA1P42261 906 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 PTGFRP43088 359 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 SYKP43405 635 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 SLC6A8P48029 635 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 HLCSP50747 726 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 MNAT1P51948 309 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 DNAJC3Q13217 504 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 NKAIN2Q5VXU1 208 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 LRRC66Q68CR7 880 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 ASPHD2Q6ICH7 369 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 NIPAL3Q6P499 406 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 STOX1Q6ZVD7 989 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 BZW1Q7L1Q6 419 aaKnown RBP3.9□□□□□ -1.79
SF3B1-212ENST00000496458 BBS1Q8NFJ9 593 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 LINC01006Q8NI28 216 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 TRMT10AQ8TBZ6 339 aaKnown RBP3.9□□□□□ -1.79
SF3B1-212ENST00000496458 ISG20Q96AZ6 181 aaKnown RBP3.9□□□□□ -1.79
SF3B1-212ENST00000496458 TMIGD2Q96BF3 282 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 MAGEB18Q96M61 343 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 C11orf70Q9BRQ4 267 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 TMEM43Q9BTV4 400 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 NUP58Q9BVL2 599 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 MRPL37Q9BZE1 423 aaKnown RBP3.9□□□□□ -1.79
SF3B1-212ENST00000496458 MAGT1Q9H0U3 335 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 KLHL28Q9NXS3 571 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 PEF1Q9UBV8 284 aaKnown RBP3.9□□□□□ -1.79
SF3B1-212ENST00000496458 NARFQ9UHQ1 456 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 LCMT1Q9UIC8 334 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 ABCG2Q9UNQ0 655 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 GMEB1Q9Y692 573 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 TOPAZ1Q8N9V7 1692 aa3.9□□□□□ -1.79
SF3B1-212ENST00000496458 TRPM3Q9HCF6 1732 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-212ENST00000496458 BRD4O60885 1362 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-212ENST00000496458 USP6P35125 1406 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 SRCAPQ6ZRS2 3230 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 EPOPA6NHQ4 379 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 GOLGA6L10A6NI86 522 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 PCP4L1A6NKN8 68 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 GOLGA6L19H0YKK7 550 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 EEF2KO00418 725 aaKnown RBP3.89□□□□□ -1.79
SF3B1-212ENST00000496458 DNAJB6O75190 326 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 ZNF254O75437 659 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 UFL1O94874 794 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 SYNGR4O95473 234 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 LGI1O95970 557 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 MBD3O95983 291 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 CD1EP15812 388 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 ELK1P19419 428 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 IDSP22304 550 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 IL2RGP31785 369 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 ACADSBP45954 432 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 ZNF33BQ06732 778 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 TGM3Q08188 693 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 ASAH1Q13510 395 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 EXOSC7Q15024 291 aaKnown RBP3.89□□□□□ -1.79
SF3B1-212ENST00000496458 TRIP10Q15642 601 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 AGKQ53H12 422 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 CMPK2Q5EBM0 449 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 ZNF311Q5JNZ3 666 aa3.89□□□□□ -1.79
SF3B1-212ENST00000496458 SPANXN2Q5MJ10 180 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms