RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SLC2A7Q6PXP3 512 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 BLOC1S3Q6QNY0 202 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 ZNF704Q6ZNC4 412 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-213ENST00000496347 ADGRG3Q86Y34 549 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 WFDC8Q8IUA0 241 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 LRRC75A-AS1Q8N1F1 130 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 SLC35B4Q969S0 331 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 TMEM19Q96HH6 336 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 ARL5BQ96KC2 179 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 EBF4Q9BQW3 602 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 TMEM204Q9BSN7 226 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 OR11A1Q9GZK7 315 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 BCL2L10Q9HD36 194 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 NGBQ9NPG2 151 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 INTS9Q9NV88 658 aaKnown RBP13.94□□□□□ -0.18
HDAC4-213ENST00000496347 TMEM181Q9P2C4 612 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 TMED7Q9Y3B3 224 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 PCDHB14Q9Y5E9 798 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 A0A0G2JPF8 293 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 ZNF716A6NP11 495 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 HNRNPCL2B2RXH8 293 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 ZNF814B7Z6K7 855 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 HNRNPCL3B7ZW38 293 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 CLIC1O00299 241 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 HNRNPCL1O60812 293 aaKnown RBP13.93□□□□□ -0.18
HDAC4-213ENST00000496347 TMCC2O75069 709 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 ADAP00813 363 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 HNRNPCL4P0DMR1 293 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 PPIBP23284 216 aaKnown RBP13.93□□□□□ -0.18
HDAC4-213ENST00000496347 HOXC12P31275 282 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 COPZ1P61923 177 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 SLC35A1P78382 337 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 H3F3AP84243 136 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 SQLEQ14534 574 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 RPS26P11Q5JNZ5 115 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-213ENST00000496347 SHEQ5VZ18 495 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 ZNF100Q8IYN0 542 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 BBS10Q8TAM1 723 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 HSD17B8Q92506 261 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 APH1AQ96BI3 265 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 SPDL1Q96EA4 605 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 PLPPR2Q96GM1 343 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 DLL4Q9NR61 685 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 RLIMQ9NVW2 624 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 MALT1Q9UDY8 824 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 CORO2BQ9UQ03 480 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 IFT52Q9Y366 437 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 GMEB1Q9Y692 573 aa13.93□□□□□ -0.18
HDAC4-213ENST00000496347 USF3Q68DE3 2245 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 TMEM72A0PK05 275 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 SMPD2O60906 423 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 FOSL1P15407 271 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 TAB1Q15750 504 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 WBP2NLQ6ICG8 309 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 PAQR6Q6TCH4 344 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 BHLHA15Q7RTS1 189 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-213ENST00000496347 VRK2Q86Y07 508 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 KRTAP1-3Q8IUG1 177 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 MAGEB18Q96M61 343 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 SIKE1Q9BRV8 207 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 SPATA9Q9BWV2 254 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 ADAM19Q9H013 955 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 RABEP2Q9H5N1 569 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 SLC25A37Q9NYZ2 338 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 CCDC167Q9P0B6 97 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 SLC9A8Q9Y2E8 581 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 NOSIPQ9Y314 301 aaKnown RBP13.92□□□□□ -0.18
HDAC4-213ENST00000496347 ZANQ9Y493 2812 aa13.92□□□□□ -0.18
HDAC4-213ENST00000496347 C5orf58C9J3I9 102 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 HS3ST1O14792 307 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 ARHGEF9O43307 516 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 ETS2P15036 469 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 ACAA2P42765 397 aaKnown RBP13.91□□□□□ -0.18
HDAC4-213ENST00000496347 OR2B6P58173 313 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 Q5PR19 223 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 GCNT6Q5T4J0 391 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 FBXW9Q5XUX1 488 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 SEZ6L2Q6UXD5 910 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 P2RY8Q86VZ1 359 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 FUNDC1Q8IVP5 155 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 WFDC11Q8NEX6 87 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 CKAP2Q8WWK9 683 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 ESRP2Q9H6T0 727 aaKnown RBP13.91□□□□□ -0.18
HDAC4-213ENST00000496347 PRSS50Q9UI38 385 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 ZNF232Q9UNY5 417 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 RNF115Q9Y4L5 304 aa13.91□□□□□ -0.18
HDAC4-213ENST00000496347 TRBV5-3A0A0A0MS03 114 aa13.9□□□□□ -0.18
HDAC4-213ENST00000496347 ZC3H12DA2A288 527 aaKnown RBP13.9□□□□□ -0.18
HDAC4-213ENST00000496347 LYZL6O75951 148 aa13.9□□□□□ -0.18
HDAC4-213ENST00000496347 GPIP06744 558 aa13.9□□□□□ -0.18
HDAC4-213ENST00000496347 NUDT7P0C024 238 aa13.9□□□□□ -0.18
HDAC4-213ENST00000496347 GKN3PP0CG01 181 aa13.9□□□□□ -0.18
HDAC4-213ENST00000496347 GGT1P19440 569 aa13.9□□□□□ -0.18
HDAC4-213ENST00000496347 CCNA2P20248 432 aa13.9□□□□□ -0.18
HDAC4-213ENST00000496347 CXCR1P25024 350 aa13.9□□□□□ -0.18
HDAC4-213ENST00000496347 EDNRAP25101 427 aa13.9□□□□□ -0.18
HDAC4-213ENST00000496347 IDUAP35475 653 aa13.9□□□□□ -0.18
HDAC4-213ENST00000496347 NKX6-1P78426 367 aaPredicted RBP13.9□□□□□ -0.18
HDAC4-213ENST00000496347 TSC22D1Q15714 1073 aa13.9□□□□□ -0.18
HDAC4-213ENST00000496347 TIMM23BQ5SRD1 257 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms