RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 POT1Q9NUX5 634 aa14.16□□□□□ -0.14
SDF4-207ENST00000494748 FBXL2Q9UKC9 423 aa14.16□□□□□ -0.14
SDF4-207ENST00000494748 ACSL5Q9ULC5 683 aa14.16□□□□□ -0.14
SDF4-207ENST00000494748 FOXJ3Q9UPW0 622 aa14.16□□□□□ -0.14
SDF4-207ENST00000494748 DNASE2O00115 360 aaPredicted RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 ITGA10O75578 1167 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 ECDO95905 644 aaPredicted RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 SERPINA3P01011 423 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 IL5P05113 134 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 PRKACAP17612 351 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 DCTDP32321 178 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 ARHGAP11BQ3KRB8 267 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 HES5Q5TA89 166 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 LILRA6Q6PI73 481 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 SLC36A1Q7Z2H8 476 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 ANKRD33Q7Z3H0 272 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 PDCD1LG2Q9BQ51 273 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 XKR8Q9H6D3 395 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 APOBEC3BQ9UH17 382 aaKnown RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 OPN4Q9UHM6 478 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 GLS2Q9UI32 602 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 HRH3Q9Y5N1 445 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 COL4A2P08572 1712 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 MKI67P46013 3256 aaKnown RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 FAM86C2PA6NEL3 165 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 NDUFB6O95139 128 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 CD1AP06126 327 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 MPIP34949 423 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 P2RX1P51575 399 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 PSMA6P60900 246 aaKnown RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 MAT1AQ00266 395 aaKnown RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 DUSP5Q16690 384 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 OR7E24Q6IFN5 339 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 ERN2Q76MJ5 926 aaKnown RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 SERPINA12Q8IW75 414 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 LSM14AQ8ND56 463 aaKnown RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 ZNRF4Q8WWF5 429 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 KRCC1Q9NPI7 259 aaPredicted RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 KLHL9Q9P2J3 617 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 WNT6Q9Y6F9 365 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 DNAH14Q0VDD8 3507 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 A0A087WV48 116 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 IFITM5A6NNB3 132 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 HMSDA8MTL9 139 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 SNRPGP15A8MWD9 76 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 RNGTTO60942 597 aaKnown RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 ARL6IP5O75915 188 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 KRT33AO76009 404 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 PPP1R3DO95685 299 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 LRG1P02750 347 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 FCER2P06734 321 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 BMP7P18075 431 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 ACTC1P68032 377 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 ACTA1P68133 377 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 NTHL1P78549 312 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 ZNF77Q15935 545 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 SPOUT1Q5T280 376 aaKnown RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 NAXDQ8IW45 347 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 OR2L5Q8NG80 312 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 RGP1Q92546 391 aaPredicted RBP14.15□□□□□ -0.14
SDF4-207ENST00000494748 BPIFA2Q96DR5 249 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 IFT46Q9NQC8 304 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 WDR45Q9Y484 360 aa14.15□□□□□ -0.14
SDF4-207ENST00000494748 C4BPBP20851 252 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 SIRPAP78324 504 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 ZNF660Q6AZW8 331 aaPredicted RBP14.14□□□□□ -0.15
SDF4-207ENST00000494748 C12orf40Q86WS4 652 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 LINC00518Q8N0U6 118 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 ADAMTS15Q8TE58 950 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 SDF2Q99470 211 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 NOX4Q9NPH5 578 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 C2orf42Q9NWW7 574 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 RABL2AQ9UBK7 228 aaPredicted RBP14.14□□□□□ -0.15
SDF4-207ENST00000494748 RABL2BQ9UNT1 228 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 C5orf42Q9H799 3197 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 PDCD5O14737 125 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 PRICKLE3O43900 615 aaPredicted RBP14.14□□□□□ -0.15
SDF4-207ENST00000494748 RCBTB2O95199 551 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 THBS1P07996 1170 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 SRMP19623 302 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 MAGEB1P43366 347 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 CAPZA2P47755 286 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 EXOSC6Q5RKV6 272 aaKnown RBP14.14□□□□□ -0.15
SDF4-207ENST00000494748 SYS1Q8N2H4 156 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 EID2Q8N6I1 236 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 OR5M1Q8NGP8 315 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 ZNF671Q8TAW3 534 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 FBXO34Q9NWN3 711 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 SESN1Q9Y6P5 492 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 GON4LQ3T8J9 2241 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 C8AP07357 584 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 ADRB3P13945 408 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 MST1P26927 711 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 PWWP2BQ6NUJ5 590 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 RPL13AP3Q6NVV1 102 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 FCRLAQ7L513 359 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 SLC25A18Q9H1K4 315 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 MCCC2Q9HCC0 563 aa14.14□□□□□ -0.15
SDF4-207ENST00000494748 KLF2Q9Y5W3 355 aaPredicted RBP14.14□□□□□ -0.15
SDF4-207ENST00000494748 CCL16O15467 120 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms