RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 HPCAP84074 193 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 H3F3AP84243 136 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 SLC25A3Q00325 362 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 FAPQ12884 760 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 TNK1Q13470 666 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 PPA1Q15181 289 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 RPS26P11Q5JNZ5 115 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-208ENST00000494728 HHATQ5VTY9 493 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 B3GLCTQ6Y288 498 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 ZNF836Q6ZNA1 936 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 LRRC74BQ6ZQY2 392 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 ZNF621Q6ZSS3 439 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 MTDHQ86UE4 582 aaKnown RBP10.26□□□□□ -0.77
VTI1A-208ENST00000494728 VRK2Q86Y07 508 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 ARFGAP2Q8N6H7 521 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 VPS37AQ8NEZ2 397 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 OR52E4Q8NGH9 312 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 WDR60Q8WVS4 1066 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 OIT3Q8WWZ8 545 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 MAELQ96JY0 434 aaKnown RBP10.26□□□□□ -0.77
VTI1A-208ENST00000494728 TRNT1Q96Q11 434 aaKnown RBP10.26□□□□□ -0.77
VTI1A-208ENST00000494728 BDH2Q9BUT1 245 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 RSPO3Q9BXY4 272 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-208ENST00000494728 ESRP2Q9H6T0 727 aaKnown RBP10.26□□□□□ -0.77
VTI1A-208ENST00000494728 SERINC1Q9NRX5 453 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-208ENST00000494728 RLIMQ9NVW2 624 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 TMED7Q9Y3B3 224 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 OR5H1A6NKK0 313 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 PDLIM1O00151 329 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 ABCD4O14678 606 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 GKN3PP0CG01 181 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 PRG2P13727 222 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 GGT1P19440 569 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 TACR3P29371 465 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 RPS4XP62701 263 aaKnown RBP10.25□□□□□ -0.77
VTI1A-208ENST00000494728 EPS8Q12929 822 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 PDK3Q15120 406 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 C9orf135Q5VTT2 229 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 FBXW9Q5XUX1 488 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 SPATA19Q7Z5L4 167 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 ZNF100Q8IYN0 542 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 OR52N5Q8NH56 324 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 SMAP2Q8WU79 429 aaPredicted RBP10.25□□□□□ -0.77
VTI1A-208ENST00000494728 APH1AQ96BI3 265 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 TLCD1Q96CP7 247 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 TRAF4Q9BUZ4 470 aaPredicted RBP10.25□□□□□ -0.77
VTI1A-208ENST00000494728 THAP1Q9NVV9 213 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 MALT1Q9UDY8 824 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 GDF2Q9UK05 429 aaPredicted RBP10.25□□□□□ -0.77
VTI1A-208ENST00000494728 ADAM21Q9UKJ8 722 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 LIPT1Q9Y234 373 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 NOSIPQ9Y314 301 aaKnown RBP10.25□□□□□ -0.77
VTI1A-208ENST00000494728 HDGFL3Q9Y3E1 203 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 FLVCR1Q9Y5Y0 555 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 MALRD1Q5VYJ5 2156 aa10.25□□□□□ -0.77
VTI1A-208ENST00000494728 ANK2Q01484 3957 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 A0A1W2PP18 115 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 CDHR4A6H8M9 788 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 KIAA1324LA8MWY0 1029 aaPredicted RBP10.24□□□□□ -0.77
VTI1A-208ENST00000494728 RNF223E7ERA6 249 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 BCHEP06276 602 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 NUDT7P0C024 238 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 HOXB9P17482 250 aaPredicted RBP10.24□□□□□ -0.77
VTI1A-208ENST00000494728 ACVR1BP36896 505 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 ACAA2P42765 397 aaKnown RBP10.24□□□□□ -0.77
VTI1A-208ENST00000494728 POLR2HP52434 150 aaKnown RBP10.24□□□□□ -0.77
VTI1A-208ENST00000494728 CDH11P55287 796 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 OR2B6P58173 313 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 MAGOHP61326 146 aaKnown RBP10.24□□□□□ -0.77
VTI1A-208ENST00000494728 BNIP2Q12982 314 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 PDCD4Q53EL6 469 aaKnown RBP10.24□□□□□ -0.77
VTI1A-208ENST00000494728 TIMM23BQ5SRD1 257 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 NXNQ6DKJ4 435 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 CASP12Q6UXS9 341 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 DNM1P46Q6ZS02 220 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 COMTD1Q86VU5 262 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 CMIPQ8IY22 773 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 KIRREL3Q8IZU9 778 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 C10orf111Q8N326 155 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 PIGXQ8TBF5 258 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 SLCO5A1Q9H2Y9 848 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 EMC3Q9P0I2 261 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 TMEM181Q9P2C4 612 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 SLC25A15Q9Y619 301 aa10.24□□□□□ -0.77
VTI1A-208ENST00000494728 SPIN1Q9Y657 262 aaPredicted RBP10.24□□□□□ -0.77
VTI1A-208ENST00000494728 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.23□□□□□ -0.772e-6■□□□□ 8.2
VTI1A-208ENST00000494728 CFAP73A6NFT4 308 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 TRPC5OSA6NMA1 111 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 E7EQL1 145 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 FAAHO00519 579 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 RFXANKO14593 260 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 FRS3O43559 492 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 DNPH1O43598 174 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 NR2F1P10589 423 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 IDO1P14902 403 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 SLC1A3P43003 542 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 ZNF83P51522 516 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 P2RY4P51582 365 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 LGALS3BPQ08380 585 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms