RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 NT5EP21589 574 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 HOXD10P28358 340 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 RDXP35241 583 aaKnown RBP3.2□□□□□ -1.9
SMC4-224ENST00000494612 IFNAR2P48551 515 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 STX17P56962 302 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 SELPLGQ14242 412 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 SBK1Q52WX2 424 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 PYHIN1Q6K0P9 492 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 FAM199XQ6PEV8 388 aaPredicted RBP3.2□□□□□ -1.9
SMC4-224ENST00000494612 CXCL17Q6UXB2 119 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 C16orf62Q7Z3J2 963 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 ATP6V0D2Q8N8Y2 350 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 SPRYD4Q8WW59 207 aaPredicted RBP3.2□□□□□ -1.9
SMC4-224ENST00000494612 RIT2Q99578 217 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 ALG12Q9BV10 488 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 SPATA16Q9BXB7 569 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 TMCC3Q9ULS5 477 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 UBQLN1Q9UMX0 589 aaKnown RBP3.2□□□□□ -1.9
SMC4-224ENST00000494612 CA5BQ9Y2D0 317 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 VSTM2BA6NLU5 285 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 G3V4G9 280 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 K7ENP7 123 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 KIAA0754O94854 1291 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 HSPB1P04792 205 aaKnown RBP3.19□□□□□ -1.9
SMC4-224ENST00000494612 ZNF19P17023 458 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 POLR2EP19388 210 aaKnown RBP3.19□□□□□ -1.9
SMC4-224ENST00000494612 TPSB2P20231 275 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 PSMB1P20618 241 aaKnown RBP3.19□□□□□ -1.9
SMC4-224ENST00000494612 CHI3L1P36222 383 aaPredicted RBP3.19□□□□□ -1.9
SMC4-224ENST00000494612 RIPK4P57078 832 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 TPSAB1Q15661 275 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 SYPL1Q16563 259 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 ISXQ2M1V0 245 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 TP53I3Q53FA7 332 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 PRR30Q53SZ7 412 aaPredicted RBP3.19□□□□□ -1.9
SMC4-224ENST00000494612 OR2B11Q5JQS5 317 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 C10orf120Q5SQS8 335 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 FAHD2BQ6P2I3 314 aaPredicted RBP3.19□□□□□ -1.9
SMC4-224ENST00000494612 KIR3DL3Q8N743 410 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 ZNF564Q8TBZ8 553 aaPredicted RBP3.19□□□□□ -1.9
SMC4-224ENST00000494612 PAQR8Q8TEZ7 354 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 FAHD2AQ96GK7 314 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 IL4I1Q96RQ9 567 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 TEX13BQ9BXU2 312 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 GLIPR2Q9H4G4 154 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 ZNF702PQ9H963 129 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 RAB18Q9NP72 206 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 SLC17A5Q9NRA2 495 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 ANGPTL2Q9UKU9 493 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 WDR45Q9Y484 360 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 ATP6V0A2Q9Y487 856 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 LY75O60449 1722 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 DOT1LQ8TEK3 1739 aa3.19□□□□□ -1.9
SMC4-224ENST00000494612 USP47Q96K76 1375 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 A8MU10 97 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 ZNF705EA8MWA4 302 aaPredicted RBP3.18□□□□□ -1.9
SMC4-224ENST00000494612 K7EQM0 130 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 SULT2B1O00204 365 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 TBL1XO60907 577 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 CABYRO75952 493 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 DNAH10OSP0CZ25 163 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 PRG2P13727 222 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 HNF1AP20823 631 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 TBXA2RP21731 343 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 RAB40BQ12829 278 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 PRR4Q16378 134 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 AANATQ16613 207 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 KYAT1Q16773 422 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 OLFML2AQ68BL7 652 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 HSD17B13Q7Z5P4 300 aaPredicted RBP3.18□□□□□ -1.9
SMC4-224ENST00000494612 CLEC4FQ8N1N0 589 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 ZNF540Q8NDQ6 660 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 IPMKQ8NFU5 416 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 C16orf74Q96GX8 76 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 MAGEB18Q96M61 343 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 AMDHD1Q96NU7 426 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 ZNF607Q96SK3 696 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 CNPY3Q9BT09 278 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 RNF126Q9BV68 326 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 C19orf24Q9BVV8 132 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 RMND5AQ9H871 391 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 NANSQ9NR45 359 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 WRAP73Q9P2S5 460 aaPredicted RBP3.18□□□□□ -1.9
SMC4-224ENST00000494612 ZNF221Q9UK13 617 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 PLLPQ9Y342 182 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 FRMPD4Q14CM0 1322 aa3.18□□□□□ -1.9
SMC4-224ENST00000494612 LTN1O94822 1766 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 C5P01031 1676 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 ANKRD36BQ8N2N9 1353 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 EPOPA6NHQ4 379 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 H0YCG3 227 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 CPLX1O14810 134 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 MSH4O15457 936 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 ZNF264O43296 627 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 GMFGO60234 142 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 TBX19O60806 448 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 SERF1AO75920 110 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 IGHV3-23P01764 117 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 STSP08842 583 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 PGCP20142 388 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms