RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PIF1Q9H611 641 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 MAGIXQ9H6Y5 334 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 YY1AP1Q9H869 796 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 TPT1P8Q9HAU6 139 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 DNAJB12Q9NXW2 375 aaKnown RBP11.82□□□□□ -0.52
ERCC3-209ENST00000494464 KCNE5Q9UJ90 142 aa11.82□□□□□ -0.52
ERCC3-209ENST00000494464 MCTS1Q9ULC4 181 aaKnown RBP11.82□□□□□ -0.52
ERCC3-209ENST00000494464 CENPVL1A0A0U1RR11 272 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 TNFSF11O14788 317 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 FCMRO60667 390 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 SS18L1O75177 396 aaPredicted RBP11.81□□□□□ -0.52
ERCC3-209ENST00000494464 AQP8O94778 261 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 CGAP01215 116 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 OR12D1P0DN82 309 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 RAP2AP10114 183 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 NID1P14543 1247 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 UQCRBP14927 111 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 SELENBP1Q13228 472 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 CBFBQ13951 182 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 VEZF1Q14119 521 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 LRRC36Q1X8D7 754 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 NDUFAF6Q330K2 333 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 FAM98BQ52LJ0 330 aaKnown RBP11.81□□□□□ -0.52
ERCC3-209ENST00000494464 PDSS1Q5T2R2 415 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 TYW3Q6IPR3 259 aaKnown RBP11.81□□□□□ -0.52
ERCC3-209ENST00000494464 FRRS1Q6ZNA5 592 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 FAM214BQ7L5A3 538 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 BTLAQ7Z6A9 289 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 ZNF619Q8N2I2 560 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 C10orf111Q8N326 155 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 TMCO5AQ8N6Q1 288 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 OR5W2Q8NH69 310 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 XAGE5Q8WWM1 108 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 RAB8BQ92930 207 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 FAM162AQ96A26 154 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 EME1Q96AY2 570 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 CENPNQ96H22 339 aaPredicted RBP11.81□□□□□ -0.52
ERCC3-209ENST00000494464 GMPPAQ96IJ6 420 aaPredicted RBP11.81□□□□□ -0.52
ERCC3-209ENST00000494464 DACH2Q96NX9 599 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 POLDIP3Q9BY77 421 aaKnown RBP11.81□□□□□ -0.52
ERCC3-209ENST00000494464 LAT2Q9GZY6 243 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 RAD21L1Q9H4I0 556 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 TMEM185BQ9H7F4 350 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 DCAF13Q9NV06 445 aaKnown RBP11.81□□□□□ -0.52
ERCC3-209ENST00000494464 MKLN1Q9UL63 735 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 RAB26Q9ULW5 256 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 WDR45Q9Y484 360 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 HEATR5AQ86XA9 2040 aa11.81□□□□□ -0.52
ERCC3-209ENST00000494464 A0A0J9YW62 118 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 GJE1A6NN92 205 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 HMGN4O00479 90 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 CXCL13O43927 109 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 SMNDC1O75940 238 aaKnown RBP eCLIP11.8□□□□□ -0.52
ERCC3-209ENST00000494464 SYNGR4O95473 234 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 RPSAP08865 295 aaKnown RBP11.8□□□□□ -0.52
ERCC3-209ENST00000494464 ZNF26P17031 533 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-209ENST00000494464 IL11P20809 199 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 MAGEA8P43361 318 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 RNF144AP50876 292 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-209ENST00000494464 ANXA11P50995 505 aaKnown RBP11.8□□□□□ -0.52
ERCC3-209ENST00000494464 CASP9P55211 416 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 SIRPAP78324 504 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 HPCAP84074 193 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 FADDQ13158 208 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 TESK1Q15569 626 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 TOMM34Q15785 309 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-209ENST00000494464 VMACQ2NL98 169 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 HBMQ6B0K9 141 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 EIF3MQ7L2H7 374 aaKnown RBP11.8□□□□□ -0.52
ERCC3-209ENST00000494464 OR6K3Q8NGY3 331 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 LINC01560Q8TB33 94 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 ST8SIA1Q92185 356 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 NINJ1Q92982 152 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 CPNE4Q96A23 557 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-209ENST00000494464 NR1H4Q96RI1 486 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-209ENST00000494464 PRRG4Q9BZD6 226 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 Q9H521 79 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 GLRX2Q9NS18 164 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 SLC35A3Q9Y2D2 325 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 EMC9Q9Y3B6 208 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 TESMINQ9Y4I5 508 aa11.8□□□□□ -0.52
ERCC3-209ENST00000494464 HRNRQ86YZ3 2850 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-209ENST00000494464 SH3D21A4FU49 640 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 EFNA2O43921 213 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 PRSS23O95084 383 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 CSTAP01040 98 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 SHC1P29353 583 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 DNAJA1P31689 397 aaKnown RBP11.79□□□□□ -0.52
ERCC3-209ENST00000494464 CCKARP32238 428 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 PCGF2P35227 344 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 SFTPDP35247 375 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 CD79BP40259 229 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 SLC6A8P48029 635 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 CCR4P51679 360 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 CHRNB3Q05901 458 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 RBBP4Q09028 425 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 QPRTQ15274 297 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 RGNQ15493 299 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 MAPK14Q16539 360 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 ZNF239Q16600 458 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms