RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ABTB1Q969K4 478 aaPredicted RBP11.22□□□□□ -0.61
SNX17-208ENST00000493711 ALPK1Q96QP1 1244 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 BARD1Q99728 777 aaKnown RBP11.22□□□□□ -0.61
SNX17-208ENST00000493711 ZNF426Q9BUY5 554 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 OSBPL10Q9BXB5 764 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 SLC6A15Q9H2J7 730 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 TIGARQ9NQ88 270 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 C6orf203Q9P0P8 240 aaPredicted RBP11.22□□□□□ -0.61
SNX17-208ENST00000493711 NPIPA1Q9UND3 350 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 TMEM5Q9Y2B1 443 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 NTNG1Q9Y2I2 539 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 MED31Q9Y3C7 131 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 HDGFL3Q9Y3E1 203 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 ZNF337Q9Y3M9 751 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 SAMHD1Q9Y3Z3 626 aaKnown RBP11.22□□□□□ -0.61
SNX17-208ENST00000493711 LYVE1Q9Y5Y7 322 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 ZNF462Q96JM2 2506 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 DOCK10Q96BY6 2186 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 TRAV36DV7A0A075B6V5 113 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 ARRDC5A6NEK1 342 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 H3BNX3 289 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 BCKDKO14874 412 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 DNPH1O43598 174 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 DIRAS1O95057 198 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 AHSA1O95433 338 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 CELA3AP09093 270 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 TFPIP10646 304 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 CPN1P15169 458 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 BMP7P18075 431 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 FPR1P21462 350 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 RPS3AP61247 264 aaKnown RBP11.21□□□□□ -0.61
SNX17-208ENST00000493711 CSNK2A1P68400 391 aaPredicted RBP11.21□□□□□ -0.61
SNX17-208ENST00000493711 RBPJQ06330 500 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 SYT14P1Q58G82 188 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 POMZP3Q6PJE2 187 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 ESPNLQ6ZVH7 1005 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 MBOAT2Q6ZWT7 520 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 HIPK1Q86Z02 1210 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 ZNF843Q8N446 348 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 PIGXQ8TBF5 258 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 SDCCAG3Q96C92 435 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 SNRNP40Q96DI7 357 aaKnown RBP11.21□□□□□ -0.61
SNX17-208ENST00000493711 KLHL15Q96M94 604 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 SLX1AQ9BQ83 275 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 KLHDC3Q9BQ90 382 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 PRSS27Q9BQR3 290 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 MAN2C1Q9NTJ4 1040 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 LUZP4Q9P127 313 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 RHCGQ9UBD6 479 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 TRAPPC4Q9Y296 219 aa11.21□□□□□ -0.61
SNX17-208ENST00000493711 TMEM72A0PK05 275 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 SH3PXD2BA1X283 911 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 H3BML4 177 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 J3QKU1 62 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 NPIPB7O75200 414 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 CCNB2O95067 398 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 MT-ATP6P00846 226 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 THY1P04216 161 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 HOXD4P09016 255 aaPredicted RBP11.2□□□□□ -0.62
SNX17-208ENST00000493711 EDN3P14138 238 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 ZNF708P17019 499 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 IDUAP35475 653 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 LIMS1P48059 325 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 CTBP2P56545 445 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 NFATC3Q12968 1075 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 TAF11Q15544 211 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 TMEM176BQ3YBM2 270 aaPredicted RBP11.2□□□□□ -0.62
SNX17-208ENST00000493711 FAM69AQ5T7M9 428 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 WLSQ5T9L3 541 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 C1orf140Q5VVS0 124 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 PODNL1Q6PEZ8 512 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 TSPYL5Q86VY4 417 aaPredicted RBP11.2□□□□□ -0.62
SNX17-208ENST00000493711 ZDHHC13Q8IUH4 622 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 NKAIN4Q8IVV8 208 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 PQLC1Q8N2U9 271 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 OR4C15Q8NGM1 316 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 OR52J3Q8NH60 311 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 OR5K1Q8NHB7 308 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 MFSD8Q8NHS3 518 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 SLC7A13Q8TCU3 470 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 TMEM255BQ8WV15 326 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 DNAJC9Q8WXX5 260 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 LRTOMTQ8WZ04 291 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 ZNF524Q96C55 264 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 ZHX1-C8orf76Q96EF9 292 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 FUZQ9BT04 418 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 TAPBPLQ9BX59 468 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 STX18Q9P2W9 335 aaKnown RBP11.2□□□□□ -0.62
SNX17-208ENST00000493711 SLC6A5Q9Y345 797 aa11.2□□□□□ -0.62
SNX17-208ENST00000493711 A0A087WUU8 490 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 SHISA8B8ZZ34 492 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 EFNA2O43921 213 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 MGRN1O60291 552 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 EIF1BO60739 113 aaKnown RBP11.19□□□□□ -0.62
SNX17-208ENST00000493711 PMS2P2O95744 297 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 BAG2O95816 211 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 ANXA8P13928 327 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 CCNA2P20248 432 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 TCEA1P23193 301 aaKnown RBP11.19□□□□□ -0.62
SNX17-208ENST00000493711 PTGER4P35408 488 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms