RNA–Protein interactions for RNA: ENST00000493132.1

MMP11-213, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-213ENST00000493132 RNF128Q8TEB7 428 aa12.51□□□□□ -0.41
MMP11-213ENST00000493132 SLC25A43Q8WUT9 341 aaPredicted RBP12.51□□□□□ -0.41
MMP11-213ENST00000493132 LRRC58Q96CX6 371 aa12.51□□□□□ -0.41
MMP11-213ENST00000493132 OR11A1Q9GZK7 315 aa12.51□□□□□ -0.41
MMP11-213ENST00000493132 RNPEPL1Q9HAU8 725 aa12.51□□□□□ -0.41
MMP11-213ENST00000493132 CORO2BQ9UQ03 480 aa12.51□□□□□ -0.41
MMP11-213ENST00000493132 AKAP6Q13023 2319 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 MYO9AB2RTY4 2548 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 CSMD1Q96PZ7 3565 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 CDHR4A6H8M9 788 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 A8MXE2 369 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 FRS3O43559 492 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 FESP07332 822 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 THBS1P07996 1170 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 PABPC4LP0CB38 370 aaKnown RBP12.5□□□□□ -0.41
MMP11-213ENST00000493132 BMP2P12643 396 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 POU2F1P14859 743 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 KLK2P20151 261 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 SLC6A2P23975 617 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 AGTR1P30556 359 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 APOBEC1P41238 236 aaKnown RBP12.5□□□□□ -0.41
MMP11-213ENST00000493132 CDK6Q00534 326 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 EPS8Q12929 822 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 SCARB2Q14108 478 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 CAPRIN1Q14444 709 aaKnown RBP12.5□□□□□ -0.41
MMP11-213ENST00000493132 GUSBP1Q15486 140 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 ZNF311Q5JNZ3 666 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 RNF220Q5VTB9 566 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 DLEU7Q6UYE1 221 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 ZNF440Q8IYI8 595 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 CLIP4Q8N3C7 705 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 OR6K3Q8NGY3 331 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 FAM222BQ8WU58 562 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 PMM1Q92871 262 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 ARMC7Q9H6L4 198 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 ZNF232Q9UNY5 417 aa12.5□□□□□ -0.41
MMP11-213ENST00000493132 HRNRQ86YZ3 2850 aaPredicted RBP12.49□□□□□ -0.41
MMP11-213ENST00000493132 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 TMED7-TICAM2A0A0A6YYA0 188 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 SH3D21A4FU49 640 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 PRORSD1PA6NEY8 169 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 SULT2B1O00204 365 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 NME4O00746 187 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 ACOT8O14734 319 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 PGM3O95394 542 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 PRG2P13727 222 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 HSD17B1P14061 328 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 ENPP1P22413 925 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 TACR3P29371 465 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 CD79BP40259 229 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 DIO1P49895 249 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 POLR2HP52434 150 aaKnown RBP12.49□□□□□ -0.41
MMP11-213ENST00000493132 SLC7A2P52569 658 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 COPZ1P61923 177 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 FAM27E3Q08E93 113 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 CCNIQ14094 377 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 SELPLGQ14242 412 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 RNPS1Q15287 305 aaKnown RBP12.49□□□□□ -0.41
MMP11-213ENST00000493132 SAMD4BQ5PRF9 694 aaKnown RBP12.49□□□□□ -0.41
MMP11-213ENST00000493132 TMEM201Q5SNT2 666 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 GTF2IRD2BQ6EKJ0 949 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 REEP3Q6NUK4 255 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 ZNF474Q6S9Z5 364 aaPredicted RBP12.49□□□□□ -0.41
MMP11-213ENST00000493132 ARPINQ7Z6K5 226 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 SERPINA11Q86U17 422 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 GTF2IRD2Q86UP8 949 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 KRT73Q86Y46 540 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 SLC15A3Q8IY34 581 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 ZNF610Q8N9Z0 462 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 CCDC124Q96CT7 223 aaKnown RBP12.49□□□□□ -0.41
MMP11-213ENST00000493132 CGREF1Q99674 301 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 SLC39A3Q9BRY0 314 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 SPATA9Q9BWV2 254 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 KLHL4Q9C0H6 718 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 DCLRE1BQ9H816 532 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 KLHL13Q9P2N7 655 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 ANGPT4Q9Y264 503 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 IFT52Q9Y366 437 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 TMED7Q9Y3B3 224 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 CSMD2Q7Z408 3487 aa12.49□□□□□ -0.41
MMP11-213ENST00000493132 CCDC168Q8NDH2 2452 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 TMEM72A0PK05 275 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 SMAD9O15198 467 aaKnown RBP12.48□□□□□ -0.41
MMP11-213ENST00000493132 CGAP01215 116 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 CD8BP10966 210 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 CCKARP32238 428 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 SLC1A3P43003 542 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 HTR3AP46098 478 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 OR2B6P58173 313 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 RAC3P60763 192 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 CSNK2A1P68400 391 aaPredicted RBP12.48□□□□□ -0.41
MMP11-213ENST00000493132 HOXC5Q00444 222 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 POU4F3Q15319 338 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 RUNDC3AQ59EK9 446 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 PRAMEF8Q5VWM4 474 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 PRAMEF7Q5VXH5 474 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 AP1ARQ63HQ0 302 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 ZNF550Q7Z398 422 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 CDH24Q86UP0 819 aa12.48□□□□□ -0.41
MMP11-213ENST00000493132 STK32CQ86UX6 486 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms