RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 GSTA3Q16772 222 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 PDCD4Q53EL6 469 aaKnown RBP7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 COX20Q5RI15 118 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 MAVSQ7Z434 540 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 PRIMA1Q86XR5 153 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 ARFGAP2Q8N6H7 521 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 TRIML2Q8N7C3 387 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 ZIC4Q8N9L1 334 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 PIGXQ8TBF5 258 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 NEUROG1Q92886 237 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 ZNF775Q96BV0 537 aaPredicted RBP7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 TLCD1Q96CP7 247 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 RADILQ96JH8 1075 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 PANX1Q96RD7 426 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 TRAF4Q9BUZ4 470 aaPredicted RBP7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 OR11A1Q9GZK7 315 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 WDR55Q9H6Y2 383 aaPredicted RBP7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 EMC3Q9P0I2 261 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 TMEM181Q9P2C4 612 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 LAMP3Q9UQV4 416 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 CHST2Q9Y4C5 530 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC25A15Q9Y619 301 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 SPIN1Q9Y657 262 aaPredicted RBP7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 GMEB1Q9Y692 573 aa7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 V9GYY5 206 aaPredicted RBP7.38□□□□□ -1.23
SMARCB1-207ENST00000491967 TMED7-TICAM2A0A0A6YYA0 188 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 TMEM120BA0PK00 339 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 CFAP73A6NFT4 308 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 KLF11O14901 512 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 NPIPB7O75200 414 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 IGHV4-39P01824 125 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 DBIP07108 87 aaKnown RBP7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 ITGA5P08648 1049 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 IMPDH2P12268 514 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 BMP2P12643 396 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 IDO1P14902 403 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 HOXB9P17482 250 aaPredicted RBP7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 EPHA3P29320 983 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 TACR3P29371 465 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 RYKP34925 604 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 CHI3L1P36222 383 aaPredicted RBP7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 ANXA11P50995 505 aaKnown RBP7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 P2RY4P51582 365 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 POLR2HP52434 150 aaKnown RBP7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC35A1P78382 337 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 GABRA6Q16445 453 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 ZSWIM7Q19AV6 140 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 GPAT3Q53EU6 434 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 OR7E24Q6IFN5 339 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 C11orf71Q6IPW1 123 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 PAQR6Q6TCH4 344 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 MSANTD1Q6ZTZ1 278 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 CCDC103Q8IW40 242 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 ZNF440Q8IYI8 595 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 ZNF100Q8IYN0 542 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 WDR31Q8NA23 367 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 KBTBD8Q8NFY9 601 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 ZNF563Q8TA94 476 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC38A5Q8WUX1 472 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 TMEM45BQ96B21 275 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 APH1AQ96BI3 265 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 MUCL1Q96DR8 90 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 ZHX1-C8orf76Q96EF9 292 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 SF3B5Q9BWJ5 86 aaKnown RBP7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 RSPO3Q9BXY4 272 aaPredicted RBP7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 KCNK9Q9NPC2 374 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 PARPBPQ9NWS1 579 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 ASB6Q9NWX5 421 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 TAS2R16Q9NYV7 291 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 ZIM2Q9NZV7 527 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 NOSIPQ9Y314 301 aaKnown RBP7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 TMED7Q9Y3B3 224 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 MAGED1Q9Y5V3 778 aaPredicted RBP7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 FLVCR1Q9Y5Y0 555 aa7.37□□□□□ -1.23
SMARCB1-207ENST00000491967 A0A096LNT2 108 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 TMEM72A0PK05 275 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 ZC3H12DA2A288 527 aaKnown RBP7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 LIPT2A6NK58 231 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 RFXANKO14593 260 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 CLOCKO15516 846 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 MRPL33O75394 65 aaKnown RBP7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC22A3O75751 556 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 KRT75O95678 551 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 GSNP06396 782 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 TFPIP10646 304 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 PTAFRP25105 342 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 CD40P25942 277 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 IDUAP35475 653 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 FOXG1P55316 489 aaPredicted RBP7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 CLEC12BQ2HXU8 276 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC9B1Q4ZJI4 515 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 MRPL2Q5T653 305 aaKnown RBP7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 RNF220Q5VTB9 566 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 HHATQ5VTY9 493 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 PRAMEF8Q5VWM4 474 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 PRAMEF7Q5VXH5 474 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 TMEM108Q6UXF1 575 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 ZNF621Q6ZSS3 439 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 HMGN2P46Q86SG4 172 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms