RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 RFWD2Q8NHY2 731 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 MTERF3Q96E29 417 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 FAM120BQ96EK7 910 aaKnown RBP12□□□□□ -0.49
ATG4B-222ENST00000491867 BTBD2Q9BX70 525 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 QRSL1Q9H0R6 528 aaKnown RBP12□□□□□ -0.49
ATG4B-222ENST00000491867 TUBB1Q9H4B7 451 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 DUSP22Q9NRW4 184 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 SIRT3Q9NTG7 399 aaPredicted RBP12□□□□□ -0.49
ATG4B-222ENST00000491867 DCTN4Q9UJW0 460 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 TMED5Q9Y3A6 229 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 FIS1Q9Y3D6 152 aa12□□□□□ -0.49
ATG4B-222ENST00000491867 IGHV1-18A0A0C4DH31 117 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 hCG_2039718K7EN88 272 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 GTPBP1O00178 669 aaKnown RBP11.99□□□□□ -0.49
ATG4B-222ENST00000491867 GPR171O14626 319 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 WNT11O96014 354 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 CHEK2O96017 543 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 AVPP01185 164 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 CRYAAP02489 173 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 HMGN2P05204 90 aaKnown RBP11.99□□□□□ -0.49
ATG4B-222ENST00000491867 EFNA1P20827 205 aaPredicted RBP11.99□□□□□ -0.49
ATG4B-222ENST00000491867 ASMTP46597 345 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 CSNK2A1P68400 391 aaPredicted RBP11.99□□□□□ -0.49
ATG4B-222ENST00000491867 POU6F2P78424 691 aaPredicted RBP11.99□□□□□ -0.49
ATG4B-222ENST00000491867 IL1RL1Q01638 556 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 QPRTQ15274 297 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 KLHL26Q53HC5 615 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 KANK2Q63ZY3 851 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 CASP12Q6UXS9 341 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 TMPPEQ6ZT21 453 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 OR51F2Q8NH61 342 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 CDS1Q92903 461 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 ARL8AQ96BM9 186 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 SLC38A2Q96QD8 506 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 STACQ99469 402 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 SLC7A10Q9NS82 523 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 ZCCHC3Q9NUD5 404 aaKnown RBP11.99□□□□□ -0.49
ATG4B-222ENST00000491867 GIN1Q9NXP7 522 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 TREM2Q9NZC2 230 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 UPB1Q9UBR1 384 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 FBXO9Q9UK97 447 aaPredicted RBP11.99□□□□□ -0.49
ATG4B-222ENST00000491867 DNAJC15Q9Y5T4 150 aa11.99□□□□□ -0.49
ATG4B-222ENST00000491867 SH3PXD2BA1X283 911 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 H3BNH8 94 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 COPEO14579 308 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 BCL10O95999 233 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 PNPP00491 289 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 SHBGP04278 402 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 LINC00032P0C843 101 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 BCKDHAP12694 445 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 CDH2P19022 906 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-222ENST00000491867 HPCAL1P37235 193 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 LASP1Q14847 261 aaKnown RBP11.98□□□□□ -0.49
ATG4B-222ENST00000491867 ADRM1Q16186 407 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 GALNTL6Q49A17 601 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 TIGD2Q4W5G0 525 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 HIKESHIQ53FT3 197 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 C1QTNF12Q5T7M4 302 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 R3HCC1LQ7Z5L2 792 aaKnown RBP11.98□□□□□ -0.49
ATG4B-222ENST00000491867 CARM1Q86X55 608 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 C10orf107Q8IVU9 208 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 GSPT2Q8IYD1 628 aaKnown RBP11.98□□□□□ -0.49
ATG4B-222ENST00000491867 BPIFB2Q8N4F0 458 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 TEX29Q8N6K0 151 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 TMCO5AQ8N6Q1 288 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 CHMP6Q96FZ7 201 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 DOK1Q99704 481 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 KATNB1Q9BVA0 655 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 PIGUQ9H490 435 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 UNKLQ9H9P5 680 aaKnown RBP11.98□□□□□ -0.49
ATG4B-222ENST00000491867 DYNLRB1Q9NP97 96 aa11.98□□□□□ -0.49
ATG4B-222ENST00000491867 DDX28Q9NUL7 540 aaKnown RBP11.98□□□□□ -0.49
ATG4B-222ENST00000491867 ETV2O00321 342 aaPredicted RBP11.97□□□□□ -0.49
ATG4B-222ENST00000491867 WNT9BO14905 357 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 SCAMP2O15127 329 aaKnown RBP11.97□□□□□ -0.49
ATG4B-222ENST00000491867 IGFBP1P08833 259 aaPredicted RBP11.97□□□□□ -0.49
ATG4B-222ENST00000491867 GAAP10253 952 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 SAGP10523 405 aaPredicted RBP11.97□□□□□ -0.49
ATG4B-222ENST00000491867 KRT4P19013 534 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 ATP6V1C1P21283 382 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 CCR4P51679 360 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 SLC16A1P53985 500 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 PCLAFQ15004 111 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 SYT14P1Q58G82 188 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.97□□□□□ -0.49
ATG4B-222ENST00000491867 CCDC103Q8IW40 242 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 DDIASQ8IXT1 998 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 OR5W2Q8NH69 310 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 PIGXQ8TBF5 258 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 DNAJA3Q96EY1 480 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 RHOXF2Q9BQY4 288 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 GATA5Q9BWX5 397 aaPredicted RBP11.97□□□□□ -0.49
ATG4B-222ENST00000491867 HOXD1Q9GZZ0 328 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 ATP6V1HQ9UI12 483 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 MID2Q9UJV3 735 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 PPIAL4AQ9Y536 164 aa11.97□□□□□ -0.49
ATG4B-222ENST00000491867 TRAV20A0A0B4J274 112 aa11.96□□□□□ -0.49
ATG4B-222ENST00000491867 TMEM129A0AVI4 362 aa11.96□□□□□ -0.49
ATG4B-222ENST00000491867 SMIM23A6NLE4 172 aa11.96□□□□□ -0.49
ATG4B-222ENST00000491867 ESPNB1AK53 854 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms