RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 SELENOWP63302 87 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 DAZAP2Q15038 168 aaPredicted RBP13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 SF3B4Q15427 424 aaKnown RBP eCLIP13.47□□□□□ -0.258e-7■■■□□ 16.4
CDC42SE1-205ENST00000491825 WBP2NLQ6ICG8 309 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 C3orf33Q6P1S2 294 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 PLEKHM3Q6ZWE6 761 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 RANBP3LQ86VV4 465 aaPredicted RBP13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 CDC20BQ86Y33 519 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 C9orf106Q8NAJ2 232 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 FAM156AQ8NDB6 213 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 OR5M1Q8NGP8 315 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 ZPLD1Q8TCW7 415 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 TRIB1Q96RU8 372 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 BTBD10Q9BSF8 475 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 PCDHAC1Q9H158 963 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 MUC13Q9H3R2 512 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 CALHM2Q9HA72 323 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 ADPRHL2Q9NX46 363 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 EGFL7Q9UHF1 273 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 SNX13Q9Y5W8 968 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 MED12Q93074 2177 aa13.47□□□□□ -0.25
CDC42SE1-205ENST00000491825 AKAP6Q13023 2319 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 KIAA1549Q9HCM3 1950 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 GJE1A6NN92 205 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 H3BML4 177 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 GYG2O15488 501 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 IL18BPO95998 194 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 CTSSP25774 331 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 FKBP2P26885 142 aaKnown RBP13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 HTR2AP28223 471 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 POLR2HP52434 150 aaKnown RBP13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 NCALDP61601 193 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 SORDQ00796 357 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 MERTKQ12866 999 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 KRTAP21-3Q3LHN1 58 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 GLYATQ6IB77 296 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 CBLL1Q75N03 491 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 GGNQ86UU5 652 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 TGIF2LYQ8IUE0 185 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 SLC25A43Q8WUT9 341 aaPredicted RBP13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 LZICQ8WZA0 190 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 PROX1Q92786 737 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 LRRC46Q96FV0 321 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 TUBA1CQ9BQE3 449 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 TRIM2Q9C040 744 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 ADAM19Q9H013 955 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 C12orf10Q9HB07 376 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 CHRNA9Q9UGM1 479 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 PACSIN3Q9UKS6 424 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 SLC9A8Q9Y2E8 581 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 PLEKHA6Q9Y2H5 1048 aa13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 SPIN1Q9Y657 262 aaPredicted RBP13.46□□□□□ -0.25
CDC42SE1-205ENST00000491825 ARHGAP21Q5T5U3 1957 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 PRRC2AP48634 2157 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 M0R3H8 397 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 ARPC2O15144 300 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 ADAMDEC1O15204 470 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 GMNNO75496 209 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 SERPINA1P01009 418 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 CD99P14209 185 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 NCK1P16333 377 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 TCN1P20061 433 aaPredicted RBP13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 IL11P20809 199 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 OPRM1P35372 400 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 STARP49675 285 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 AGFG1P52594 562 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 FOXF2Q12947 444 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 NPTX1Q15818 432 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 CTU2Q2VPK5 515 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 SWT1Q5T5J6 900 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 PAMR1Q6UXH9 720 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 ESPNLQ6ZVH7 1005 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 LILRA2Q8N149 483 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 MEIOBQ8N635 442 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 OR6T1Q8NGN1 323 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 FAM162AQ96A26 154 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 C3orf49Q96BT1 292 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 ADGRG7Q96K78 797 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 UCN2Q96RP3 112 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 WFDC6Q9BQY6 131 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 DCAF13Q9NV06 445 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 ACTR3BQ9P1U1 418 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 OSGIN1Q9UJX0 560 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 RPS6KA6Q9UK32 745 aa13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 SAMD4AQ9UPU9 718 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-205ENST00000491825 TUBAL3A6NHL2 446 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 EEF1E1-BLOC1S5C9J1V9 151 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 H0Y3Z8 333 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 EEF1E1O43324 174 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 ZNF208O43345 1280 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 EFNA2O43921 213 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 TPST2O60704 377 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 EPXP11678 715 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 TACR3P29371 465 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 CLK1P49759 484 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 CLDN15P56746 228 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 CLDN20P56880 219 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 ZNF613Q6PF04 617 aa13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 ATG4DQ86TL0 474 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE1-205ENST00000491825 CARM1Q86X55 608 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms