RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SEC14L4Q9UDX3 406 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF780BQ9Y6R6 833 aa8.6□□□□□ -1.03
BRCA1-219ENST00000491747 HELZ2Q9BYK8 2649 aaKnown RBP8.6□□□□□ -1.03
BRCA1-219ENST00000491747 M0R129 80 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 TNFRSF21O75509 655 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 CBX7O95931 251 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 CBLP22681 906 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 GNLYP22749 145 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 CHMP24386 653 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 GSTM5P46439 218 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 MVDP53602 400 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 CRISP1P54107 249 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 SCN1BQ07699 218 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 MRPL49Q13405 166 aaKnown RBP8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF630Q2M218 657 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-219ENST00000491747 MPEG1Q2M385 716 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF385BQ569K4 471 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 MEDAGQ5VYS4 303 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 SLC25A25Q6KCM7 469 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 IL20RBQ6UXL0 311 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 VASH1Q7L8A9 365 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-219ENST00000491747 GALNTL5Q7Z4T8 443 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 LRRC25Q8N386 305 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-219ENST00000491747 TMEM156Q8N614 296 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF441Q8N8Z8 693 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 OR9Q1Q8NGQ5 310 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 GOT1L1Q8NHS2 421 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-219ENST00000491747 NUBPLQ8TB37 319 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 RASSF5Q8WWW0 418 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ST6GAL2Q96JF0 529 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 WDFY2Q96P53 400 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 OPALINQ96PE5 141 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 SLC35A5Q9BS91 424 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 WWTR1Q9GZV5 400 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 OR10A5Q9H207 317 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ACER3Q9NUN7 267 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 V9GYH0 126 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 NCKAP5O14513 1909 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 FASNP49327 2511 aaKnown RBP8.59□□□□□ -1.03
BRCA1-219ENST00000491747 MEIOCA2RUB1 952 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 SLC35F4A4IF30 521 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 HMX3A6NHT5 357 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 FAM25AB3EWG3 89 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 FAM25CB3EWG5 89 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 FAM25GB3EWG6 89 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 SLC25A12O75746 678 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 RHCEP18577 417 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ENDOUP21128 410 aaKnown RBP8.59□□□□□ -1.03
BRCA1-219ENST00000491747 MST1P26927 711 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 RPS19P39019 145 aaKnown RBP8.59□□□□□ -1.03
BRCA1-219ENST00000491747 RPL3P39023 403 aaKnown RBP8.59□□□□□ -1.03
BRCA1-219ENST00000491747 LIMS1P48059 325 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 HBA1P69905 142 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 CDK6Q00534 326 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 C1DQ13901 141 aaKnown RBP8.59□□□□□ -1.03
BRCA1-219ENST00000491747 SPHARQ15513 63 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 TBRG1Q3YBR2 411 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF628Q5EBL2 1059 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 COX20Q5RI15 118 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 VWA5B2Q8N398 1253 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 OR5L2Q8NGL0 311 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 OR9A2Q8NGT5 310 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 C16orf52Q8NHV5 167 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 NFKBIDQ8NI38 313 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 GRPEL2Q8TAA5 225 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 GPR151Q8TDV0 419 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ASB15Q8WXK1 588 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 KAT2AQ92830 837 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ADIPOR1Q96A54 375 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 GAL3ST4Q96RP7 486 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 SLC22A4Q9H015 551 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 REEP4Q9H6H4 257 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 HHATLQ9HCP6 504 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 GPATCH2Q9NW75 528 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ATP6V1HQ9UI12 483 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ANGPT4Q9Y264 503 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 ENPP4Q9Y6X5 453 aa8.59□□□□□ -1.03
BRCA1-219ENST00000491747 IQCMA0A1B0GVH7 501 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 ZNF670-ZNF695F2Z2N8 137 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 J3KTA2 159 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 NME2P1O60361 137 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 CYP7B1O75881 506 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 IFNW1P05000 195 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 YES1P07947 543 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 IL7P13232 177 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 CD46P15529 392 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 NME2P22392 152 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 RFX2P48378 723 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 PSPHP78330 225 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 SRSF1Q07955 248 aaKnown RBP eCLIP8.58□□□□□ -1.04
BRCA1-219ENST00000491747 KLHL17Q6TDP4 642 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 TMEM64Q6YI46 380 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 UTS2BQ765I0 119 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 SLC29A4Q7RTT9 530 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-219ENST00000491747 GALNT11Q8NCW6 608 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 TRIM63Q969Q1 353 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 NEDD4LQ96PU5 975 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 TMEM246Q9BRR3 403 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 MND1Q9BWT6 205 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms