RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 EMP2P54851 167 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 TRAM2Q15035 370 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 ZNF311Q5JNZ3 666 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 OR8D4Q8NGM9 314 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 OR2Y1Q8NGV0 311 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 C16orf58Q96GQ5 468 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 DGAT2Q96PD7 388 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 TM9SF2Q99805 663 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 TCFL5Q9UL49 500 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 S1PR1P21453 382 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 PRR5P85299 388 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 DUSP8Q13202 625 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 TBRG1Q3YBR2 411 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 PYDC2Q56P42 97 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 ZNF730Q6ZMV8 503 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 RASSF6Q6ZTQ3 369 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 UTS2BQ765I0 119 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 PRICKLE2Q7Z3G6 844 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 ZNF321PQ8N8H1 164 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 SYT14Q8NB59 555 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 RIT1Q92963 219 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 ARHGDIGQ99819 225 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 CENPXA8MT69 81 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 ALPPP05187 535 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 FGF9P31371 208 aaPredicted RBP20.87■□□□□ 0.93
USF3-203ENST00000491165 DLSTP36957 453 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 SERTAD2Q14140 314 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 EXOSC7Q15024 291 aaKnown RBP20.87■□□□□ 0.93
USF3-203ENST00000491165 FHL5Q5TD97 284 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 TYW3Q6IPR3 259 aaKnown RBP20.87■□□□□ 0.93
USF3-203ENST00000491165 ANKRD37Q7Z713 158 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 OR52P1PQ8NH57 321 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 ARHGAP9Q9BRR9 750 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 PRR14Q9BWN1 585 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 C11orf54Q9H0W9 315 aaPredicted RBP20.87■□□□□ 0.93
USF3-203ENST00000491165 CNIH4Q9P003 139 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 IL17BQ9UHF5 180 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 NXT1Q9UKK6 140 aaKnown RBP20.87■□□□□ 0.93
USF3-203ENST00000491165 KCNE3Q9Y6H6 103 aa20.87■□□□□ 0.93
USF3-203ENST00000491165 C17orf105B2RV13 164 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 LIMS3P0CW19 117 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 LIMS4P0CW20 117 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 PGDP52209 483 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 MRPS15P82914 257 aaKnown RBP20.86■□□□□ 0.93
USF3-203ENST00000491165 FABP5Q01469 135 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 SRSF6Q13247 344 aaKnown RBP20.86■□□□□ 0.93
USF3-203ENST00000491165 SLC35F1Q5T1Q4 408 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 RRM2BQ7LG56 351 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 SHFQ7M4L6 423 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 GALNT12Q8IXK2 581 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 VWA5B2Q8N398 1253 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 FAM46AQ96IP4 442 aaKnown RBP20.86■□□□□ 0.93
USF3-203ENST00000491165 OR7D2Q96RA2 312 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 SMIM30A4D0T7 59 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 CPSF4LA6NMK7 179 aaKnown RBP20.86■□□□□ 0.93
USF3-203ENST00000491165 A8MV72 311 aaPredicted RBP20.86■□□□□ 0.93
USF3-203ENST00000491165 LRRTM2O43300 516 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 EMC8O43402 210 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 SSTR4P31391 388 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 ID4P47928 161 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 ST3GAL3Q11203 375 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 MAP4K2Q12851 820 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 CD200R1LQ6Q8B3 271 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 TMEM205Q6UW68 189 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 RDH10Q8IZV5 341 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 PIGXQ8TBF5 258 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 DIO2Q92813 273 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 RFKQ969G6 155 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 GIMAP5Q96F15 307 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 WDR77Q9BQA1 342 aaPredicted RBP20.86■□□□□ 0.93
USF3-203ENST00000491165 SLC38A1Q9H2H9 487 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 ZNF232Q9UNY5 417 aa20.86■□□□□ 0.93
USF3-203ENST00000491165 FARSAQ9Y285 508 aaKnown RBP20.86■□□□□ 0.93
USF3-203ENST00000491165 FRS3O43559 492 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 CBX7O95931 251 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 CLPSP04118 112 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 RAB40ALP0C0E4 278 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 IFNA8P32881 189 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 CDH11P55287 796 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 PPP3R1P63098 170 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 CLEC12AQ5QGZ9 265 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 VRK2Q86Y07 508 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 OR2L13Q8N349 312 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 IL22RA1Q8N6P7 574 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 ANKRD19PQ9H560 264 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 ERVK-19Q9WJR5 959 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 HS3ST3B1Q9Y662 390 aa20.85■□□□□ 0.93
USF3-203ENST00000491165 CD82P27701 267 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 SLC1A3P43003 542 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 OMPP47874 163 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 CHRNEQ04844 493 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 IL10RAQ13651 578 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 ZNF267Q14586 743 aaPredicted RBP20.84■□□□□ 0.93
USF3-203ENST00000491165 POGLUT1Q8NBL1 392 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 DMRTB1Q96MA1 342 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 ADAP2Q9NPF8 381 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 CALML5Q9NZT1 146 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 GPR55Q9Y2T6 319 aaPredicted RBP20.84■□□□□ 0.93
USF3-203ENST00000491165 CACNA1AO00555 2505 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms