RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ONECUT1Q9UBC0 465 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 CDH9Q9ULB4 789 aa3.49□□□□□ -1.85
HMGB1P38-201ENST00000490557 ERICH2A1L162 156 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 METTL21EPA6NDL7 271 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 DHRS7CA6NNS2 312 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 H0Y9J4 135 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 OR7A17O14581 309 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 ABCD4O14678 606 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 DFNA5O60443 496 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 GNA14O95837 355 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 CAPN1P07384 714 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 CD1EP15812 388 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZNF3P17036 446 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 DIO3P55073 304 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 MAB21L1Q13394 359 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 KYAT1Q16773 422 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 SBK1Q52WX2 424 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 TMEM225Q6GV28 225 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 OR8G2PQ6IF36 304 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 CENPUQ71F23 418 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 CCDC80Q76M96 950 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 EFCAB13Q8IY85 973 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 CSGALNACT2Q8N6G5 542 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 C14orf178Q8N769 122 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 LINC00469Q8N7U9 141 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZSCAN4Q8NAM6 433 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 NFAM1Q8NET5 270 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 OR5D13Q8NGL4 314 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 LINC01006Q8NI28 216 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 RAET1EQ8TD07 263 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 KIAA1143Q96AT1 154 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 UPRTQ96BW1 309 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 SLC25A38Q96DW6 304 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 TMEM80Q96HE8 168 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 HPDLQ96IR7 371 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 TSNARE1Q96NA8 513 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 PANX2Q96RD6 677 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 CHRDL1Q9BU40 450 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 ROPN1BQ9BZX4 212 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 NMUR2Q9GZQ4 415 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 COMMD4Q9H0A8 199 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 BLZF1Q9H2G9 400 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 TDRD3Q9H7E2 651 aaKnown RBP3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 C8orf33Q9H7E9 229 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 LPAR2Q9HBW0 351 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZFP14Q9HCL3 533 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 MRPL22Q9NWU5 206 aaKnown RBP3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 SLC2A8Q9NY64 477 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 PEF1Q9UBV8 284 aaKnown RBP3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 B9D1Q9UPM9 204 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 C15orf41Q9Y2V0 281 aa3.48□□□□□ -1.85
HMGB1P38-201ENST00000490557 AKNAQ7Z591 1439 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 TRAV26-1A0A087WT03 109 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 OR2AG2A6NM03 316 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 GOLGA8TH3BQL2 631 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 SDHDO14521 159 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 CHMP2AO43633 222 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 CD55P08174 381 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 BCKDHAP12694 445 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 UQCRC2P22695 453 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 CRYBB1P53674 252 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 CDH4P55283 916 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 CLDN8P56748 225 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 RPS15P62841 145 aaKnown RBP3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 TPM4P67936 248 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 PJVKQ0ZLH3 352 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 PPIL2Q13356 520 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 COTL1Q14019 142 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 MAPK6Q16659 721 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 HIKESHIQ53FT3 197 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 RAET1LQ5VY80 246 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 OR5M10Q6IEU7 315 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 UFSP1Q6NVU6 142 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 VTCN1Q7Z7D3 282 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 LHFPL4Q7Z7J7 247 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 CBWD2Q8IUF1 395 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 VSTM4Q8IW00 320 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 CEP112Q8N8E3 955 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 KCNG3Q8TAE7 436 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZNF564Q8TBZ8 553 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 MITD1Q8WV92 249 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 PIBF1Q8WXW3 757 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 ADIPOR1Q96A54 375 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 CYYR1Q96J86 154 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 C7orf34Q96L11 122 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 RPRD1AQ96P16 312 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 PANX1Q96RD7 426 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 CNPY3Q9BT09 278 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 DNTTIP1Q9H147 329 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 RGCCQ9H4X1 137 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 TMEM185BQ9H7F4 350 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 CHMP5Q9NZZ3 219 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 GCNT4Q9P109 453 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 NYAP2Q9P242 653 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 PACSIN2Q9UNF0 486 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 PIGLQ9Y2B2 252 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 PPIAL4AQ9Y536 164 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 GMPPBQ9Y5P6 360 aa3.47□□□□□ -1.85
HMGB1P38-201ENST00000490557 ESYT2A0FGR8 921 aa3.46□□□□□ -1.86
HMGB1P38-201ENST00000490557 SAGE2PA6NJ88 616 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms