RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 DDIASQ8IXT1 998 aa12.16□□□□□ -0.46
VARS-227ENST00000489979 LINC01356Q8N9X3 169 aa12.16□□□□□ -0.46
VARS-227ENST00000489979 CCDC63Q8NA47 563 aa12.16□□□□□ -0.46
VARS-227ENST00000489979 NOA1Q8NC60 698 aaKnown RBP12.16□□□□□ -0.46
VARS-227ENST00000489979 MOAP1Q96BY2 351 aa12.16□□□□□ -0.46
VARS-227ENST00000489979 BHLHE41Q9C0J9 482 aaPredicted RBP12.16□□□□□ -0.46
VARS-227ENST00000489979 SERHL2Q9H4I8 314 aa12.16□□□□□ -0.46
VARS-227ENST00000489979 TMEM181Q9P2C4 612 aa12.16□□□□□ -0.46
VARS-227ENST00000489979 DNAJC15Q9Y5T4 150 aa12.16□□□□□ -0.46
VARS-227ENST00000489979 FLVCR1Q9Y5Y0 555 aa12.16□□□□□ -0.46
VARS-227ENST00000489979 TMEM233B4DJY2 109 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 LILRA1O75019 489 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 AK1P00568 194 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 OR4A8P0C604 315 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 FKBP2P26885 142 aaKnown RBP12.15□□□□□ -0.46
VARS-227ENST00000489979 APEX1P27695 318 aaKnown RBP12.15□□□□□ -0.46
VARS-227ENST00000489979 SOAT1P35610 550 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 CLK1P49759 484 aaKnown RBP12.15□□□□□ -0.46
VARS-227ENST00000489979 CHN2P52757 468 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 PTGR1Q14914 329 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 C1QTNF12Q5T7M4 302 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 VHLLQ6RSH7 139 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 RINLQ6ZS11 566 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 GRINAQ7Z429 371 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 FAM71CQ8NEG0 241 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 TWIST2Q8WVJ9 160 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 SLC38A2Q96QD8 506 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 KCNS3Q9BQ31 491 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 ZNF350Q9GZX5 532 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 RAB1BQ9H0U4 201 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 PLK3Q9H4B4 646 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 ATAD3AQ9NVI7 634 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 TRAPPC4Q9Y296 219 aa12.15□□□□□ -0.46
VARS-227ENST00000489979 DUXAA6NLW8 204 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 PIP5K1BO14986 540 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 VENTXO95231 258 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 TACSTD2P09758 323 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 DAOP14920 347 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 GIFP27352 417 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 MAPK1P28482 360 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 PPOXP50336 477 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 IDH3GP51553 393 aaPredicted RBP12.14□□□□□ -0.47
VARS-227ENST00000489979 HBA1P69905 142 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 SLC35A1P78382 337 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 SLC17A1Q14916 467 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 EFNB3Q15768 340 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 ADIPOQQ15848 244 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 ARHGAP11BQ3KRB8 267 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 FAM174BQ3ZCQ3 159 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 EMBQ6PCB8 327 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 BHLHB9Q6PI77 547 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 TRMT10CQ7L0Y3 403 aaKnown RBP12.14□□□□□ -0.47
VARS-227ENST00000489979 C16orf62Q7Z3J2 963 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 C6orf120Q7Z4R8 191 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 C10orf107Q8IVU9 208 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 CLEC4FQ8N1N0 589 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 KRTCAP2Q8N6L1 136 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 NATD1Q8N6N6 113 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 HPS1Q92902 700 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 COQ8BQ96D53 544 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 SNX18Q96RF0 628 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 NAA11Q9BSU3 229 aaPredicted RBP12.14□□□□□ -0.47
VARS-227ENST00000489979 C1orf50Q9BV19 199 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 GATA5Q9BWX5 397 aaPredicted RBP12.14□□□□□ -0.47
VARS-227ENST00000489979 METRNQ9UJH8 293 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 SLC35A3Q9Y2D2 325 aa12.14□□□□□ -0.47
VARS-227ENST00000489979 KCNAB3O43448 404 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 EIF1BO60739 113 aaKnown RBP12.13□□□□□ -0.47
VARS-227ENST00000489979 PEX11AO75192 247 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 LYPLA1O75608 230 aaPredicted RBP12.13□□□□□ -0.47
VARS-227ENST00000489979 PDE5AO76074 875 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 SNUPNO95149 360 aaKnown RBP12.13□□□□□ -0.47
VARS-227ENST00000489979 CRYAAP02489 173 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 IMPDH2P12268 514 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 CRHR1P34998 444 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 CCT5P48643 541 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 CDH15P55291 814 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 UGT3A2Q3SY77 523 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 HMGN2P46Q86SG4 172 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 ZCCHC24Q8N2G6 241 aaKnown RBP12.13□□□□□ -0.47
VARS-227ENST00000489979 TMEM45BQ96B21 275 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 SLC35G5Q96KT7 338 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 PPP3R2Q96LZ3 170 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 PRPF18Q99633 342 aaKnown RBP12.13□□□□□ -0.47
VARS-227ENST00000489979 DUSP26Q9BV47 211 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 KATNB1Q9BVA0 655 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 OBP2BQ9NPH6 170 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 MGAM2Q2M2H8 2515 aa12.13□□□□□ -0.47
VARS-227ENST00000489979 MEGF8Q7Z7M0 2845 aa12.12□□□□□ -0.47
VARS-227ENST00000489979 TMED7-TICAM2A0A0A6YYA0 188 aa12.12□□□□□ -0.47
VARS-227ENST00000489979 RNF103-CHMP3A0A140T963 221 aa12.12□□□□□ -0.47
VARS-227ENST00000489979 TMEM72A0PK05 275 aa12.12□□□□□ -0.47
VARS-227ENST00000489979 SKAP2O75563 359 aaPredicted RBP12.12□□□□□ -0.47
VARS-227ENST00000489979 CHRNGP07510 517 aa12.12□□□□□ -0.47
VARS-227ENST00000489979 FGF4P08620 206 aa12.12□□□□□ -0.47
VARS-227ENST00000489979 EGR1P18146 543 aa12.12□□□□□ -0.47
VARS-227ENST00000489979 IDH2P48735 452 aaKnown RBP12.12□□□□□ -0.47
VARS-227ENST00000489979 NAAAQ02083 359 aa12.12□□□□□ -0.47
VARS-227ENST00000489979 TRIP10Q15642 601 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms