RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 MAVSQ7Z434 540 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 P2RY8Q86VZ1 359 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TRAF4Q9BUZ4 470 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ADAM19Q9H013 955 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 EMC3Q9P0I2 261 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TMEM181Q9P2C4 612 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 NOSIPQ9Y314 301 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TMED7Q9Y3B3 224 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 INAFM1C9JVW0 142 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PDLIM1O00151 329 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ZNF208O43345 1280 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 NDUFS7O75251 213 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 KITP10721 976 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PCSK6P29122 969 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TACR3P29371 465 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 SLC1A3P43003 542 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 OR2B6P58173 313 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TXNL4AP83876 142 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 HPCAP84074 193 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 EPS8Q12929 822 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CLEC12BQ2HXU8 276 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 SLC9B1Q4ZJI4 515 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 MRPL2Q5T653 305 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 DTX2Q86UW9 622 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TRIML2Q8N7C3 387 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PIGXQ8TBF5 258 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 RLIMQ9NVW2 624 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CISD1Q9NZ45 108 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 MALT1Q9UDY8 824 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 SLC25A15Q9Y619 301 aa17.09■□□□□ 0.33
TNFRSF1B-202ENST00000489921 DSPPQ9NZW4 1301 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 RAD51DO75771 328 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 IGHV4-39P01824 125 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ITGA5P08648 1049 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ACAA2P42765 397 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 HTR3AP46098 478 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 POLR2HP52434 150 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SLC18A1P54219 525 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 LRRC74AQ0VAA2 488 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 GABRA6Q16445 453 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 GLB1L3Q8NCI6 653 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 WDR60Q8WVS4 1066 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PMM1Q92871 262 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 APH1AQ96BI3 265 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MUCL1Q96DR8 90 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ZHX1-C8orf76Q96EF9 292 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MUS81Q96NY9 551 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 GRIP2Q9C0E4 1043 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CHST2Q9Y4C5 530 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 FLVCR1Q9Y5Y0 555 aa17.08■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SONP18583 2426 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 A0A1W2PP18 115 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TRPC5OSA6NMA1 111 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 GPR171O14626 319 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ABCD4O14678 606 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MRPL33O75394 65 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 DBIP07108 87 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TFPTP0C1Z6 253 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 NR2F1P10589 423 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ETFAP13804 333 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 IL7RP16871 459 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ACVR1BP36896 505 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SLC17A1Q14916 467 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PDCD4Q53EL6 469 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CROCCP2Q86T23 111 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 VRK2Q86Y07 508 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 UBE2J2Q8N2K1 259 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ZIC4Q8N9L1 334 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MAPK1IP1LQ8NDC0 245 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 OR52E4Q8NGH9 312 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MGARPQ8TDB4 240 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TRMT61AQ96FX7 289 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 AMBRA1Q9C0C7 1298 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SLCO5A1Q9H2Y9 848 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ASB6Q9NWX5 421 aa17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 GDF2Q9UK05 429 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1B-202ENST00000489921 A0A1W2PR80 420 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CDHR4A6H8M9 788 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CFAP73A6NFT4 308 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 KIAA1324LA8MWY0 1029 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 RNF223E7ERA6 249 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 RFXANKO14593 260 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SLC22A3O75751 556 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 IL6P05231 212 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 GKN3PP0CG01 181 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ZCCHC18P0CG32 403 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PTNP21246 168 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MAGEA8P43361 318 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SLC35A1P78382 337 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SPOCK1Q08629 439 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 FAPQ12884 760 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 GTDC1Q4AE62 458 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ZNF836Q6ZNA1 936 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SSX8Q7RTT4 187 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 WDR31Q8NA23 367 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 OR52N5Q8NH56 324 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 VPS33AQ96AX1 596 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TLCD1Q96CP7 247 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 DDIT4LQ96D03 193 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 OR52B2Q96RD2 323 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms